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Changing internal storage of positions, torqes, forces, velocities, etc.
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fixed allot of warnings, and adde the molecule
added the getA( double the_A[3][3] ) routine to the Directional Atom Class, to facilitate easier RotMat aquisition
This commit was generated by cvs2svn to compensate for changes in r10, which included commits to RCS files with non-trunk default branches.
everything you need to make libmdtools
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