# | Line 238 | Line 238 | void SimSetup::createSim( void ){ | |
---|---|---|
238 | ||
239 | mpiSim = new mpiSimulation( simnfo ); | |
240 | ||
241 | + | |
242 | + | |
243 | globalIndex = mpiSim->divideLabor(); | |
244 | ||
245 | + | |
246 | + | |
247 | // set up the local variables | |
248 | ||
249 | int localMol, allMol; | |
# | Line 649 | Line 653 | void SimSetup::makeAtoms( void ){ | |
653 | for( i=0; i<mpiSim->getMyNlocal(); i++ ) the_atoms[i]->setGlobalIndex( globalIndex[i] ); | |
654 | ||
655 | delete[] globalIndex; | |
656 | < | #endif IS_MPI |
656 | > | |
657 | > | mpiSim->mpiRefresh(); |
658 | > | #endif //IS_MPI |
659 | ||
660 | the_ff->initializeAtoms(); | |
661 | } | |
# | Line 690 | Line 696 | void SimSetup::makeBonds( void ){ | |
696 | ||
697 | #ifdef IS_MPI | |
698 | } | |
699 | < | #endif is_mpi |
699 | > | #endif //is_mpi |
700 | ||
701 | molIndex++; | |
702 | } |
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