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root/group/trunk/mdtools/interface_implementation/SimSetup.cpp
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Comparing trunk/mdtools/interface_implementation/SimSetup.cpp (file contents):
Revision 249 by chuckv, Mon Jan 27 21:28:19 2003 UTC vs.
Revision 254 by chuckv, Thu Jan 30 20:03:37 2003 UTC

# Line 238 | Line 238 | void SimSetup::createSim( void ){
238    
239    mpiSim = new mpiSimulation( simnfo );
240    
241 <  mpiSim->divideLabor();
241 >  fprintf( stderr, "about to call divideLabour.\n" );
242 >
243 >  globalIndex = mpiSim->divideLabor();
244 >
245 >  fprintf(stderr, "we're back from divideLabour\n" );
246  
247    // set up the local variables
248    
# Line 644 | Line 648 | void SimSetup::makeAtoms( void ){
648        molIndex++;
649      }
650    }
651 +
652 + #ifdef IS_MPI
653 +    for( i=0; i<mpiSim->getMyNlocal(); i++ ) the_atoms[i]->setGlobalIndex( globalIndex[i] );
654 +    
655 +    delete[] globalIndex;
656  
657 +    mpiSim->mpiRefresh();
658 + #endif //IS_MPI
659 +          
660    the_ff->initializeAtoms();
661   }
662  
# Line 684 | Line 696 | void SimSetup::makeBonds( void ){
696          
697   #ifdef IS_MPI
698        }
699 < #endif is_mpi
699 > #endif //is_mpi
700        
701        molIndex++;
702      }      

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