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1 %!TEX root = /Users/charles/Desktop/nanoglass/nanoglass.tex
2
3 \section{Analysis}
4
5 Frank first proposed local icosahedral ordering of atoms as an
6 explanation for supercooled atomic (specifically metallic) liquids,
7 and further showed that a 13-atom icosahedral cluster has a 8.4\%
8 higher binding energy the either a face centered cubic ({\sc fcc}) or
9 hexagonal close-packed ({\sc hcp}) crystal structures.\cite{19521106}
10 Icosahedra also have six five-fold symmetry axes that cannot be
11 extended indefinitely in three dimensions, which makes them long-range
12 translational order incommensurate with local icosahedral ordering.
13 This does not preclude icosahedral clusters from possessing long-range
14 {\it orientational} order. The ``frustrated'' packing of these
15 icosahedral structures into dense clusters has been proposed as a
16 model for glass formation.\cite{19871127} The size of the icosahedral
17 clusters is thought to increase until frustration prevents any further
18 growth.\cite{HOARE:1976fk} Molecular dynamics simulations of a
19 two-component Lennard-Jones glass showed that clusters of face-sharing
20 icosahedra are distributed throughout the
21 material.\cite{PhysRevLett.60.2295} Simulations of freezing of single
22 component metalic nanoclusters have shown a tendency for icosohedral
23 structure formation particularly at the surfaces of these
24 clusters.\cite{Gafner:2004bg,PhysRevLett.89.275502,Ascencio:2000qy,Chen:2004ec}
25 Experimentally, the splitting (or shoulder) on the second peak of the
26 X-ray structure factor in binary metallic glasses has been attributed
27 to the formation of tetrahedra that share faces of adjoining
28 icosahedra.\cite{Waal:1995lr}
29
30 Various structural probes have been used to characterize structural
31 order in molecular systems including: common neighbor analysis,
32 Voronoi tesselations, and orientational bond-order
33 parameters.\cite{HoneycuttJ.Dana_j100303a014,Iwamatsu:2007lr,hsu:4974,nose:1803}
34 The method that has been used most extensively for determining local
35 and extended orientational symmetry in condensed phases is the
36 bond-orientational analysis formulated by Steinhart {\it et
37 al.}\cite{Steinhardt:1983mo} In this model, a set of spherical
38 harmonics is associated with each of the near neighbors of a central
39 atom. Neighbors (or ``bonds'') are defined as having a distance from
40 the central atom that is within the first peak in the radial
41 distribution function. The spherical harmonic between a central atom
42 $i$ and a neighboring atom $j$ is
43 \begin{equation}
44 Y_{lm}\left(\vec{r}_{ij}\right)=Y_{lm}\left(\theta(\vec{r}_{ij}),\phi(\vec{r}_{ij})\right)
45 \label{eq:spharm}
46 \end{equation}
47 where, $\{ Y_{lm}(\theta,\phi)\}$ are spherical harmonics, and
48 $\theta(\vec{r})$ and $\phi(\vec{r})$ are the polar and azimuthal
49 angles made by the bond vector $\vec{r}$ with respect to a reference
50 coordinate system. We chose for simplicity the origin as defined by
51 the coordinates for our nanoparticle. (Only even-$l$ spherical
52 harmonics are considered since permutation of a pair of identical
53 particles should not affect the bond-order parameter.) The local
54 environment surrounding atom $i$ can be defined by
55 the average over all neighbors, $N_b(i)$, surrounding that atom,
56 \begin{equation}
57 \bar{q}_{lm}(i) = \frac{1}{N_{b}(i)}\sum_{j=1}^{N_b(i)} Y_{lm}(\vec{r}_{ij}).
58 \label{eq:local_avg_bo}
59 \end{equation}
60 We can further define a global average orientational-bond order over
61 all $\bar{q}_{lm}$ by calculating the average of $\bar{q}_{lm}(i)$
62 over all $N$ particles
63 \begin{equation}
64 \bar{Q}_{lm} = \frac{\sum^{N}_{i=1}N_{b}(i)\bar{q}_{lm}(i)}{\sum^{N}_{i=1}N_{b}(i)}
65 \label{eq:sys_avg_bo}
66 \end{equation}
67 The $\bar{Q}_{lm}$ contained in equation \ref{eq:sys_avg_bo} is not
68 necessarily invariant under rotations of the arbitrary reference
69 coordinate system. Second- and third-order rotationally invariant
70 combinations, $Q_l$ and $W_l$, can be taken by summing over $m$ values
71 of $\bar{Q}_{lm}$,
72 \begin{equation}
73 Q_{l} = \left( \frac{4\pi}{2 l+1} \sum^{l}_{m=-l} \left| \bar{Q}_{lm} \right|^2\right)^{1/2}
74 \label{eq:sec_ord_inv}
75 \end{equation}
76 and
77 \begin{equation}
78 \hat{W}_{l} = \frac{W_{l}}{\left( \sum^{l}_{m=-l} \left| \bar{Q}_{lm} \right|^2\right)^{3/2}}
79 \label{eq:third_ord_inv}
80 \end{equation}
81 where
82 \begin{equation}
83 W_{l} = \sum_{\substack{m_1,m_2,m_3 \\m_1 + m_2 + m_3 = 0}} \left( \begin{array}{ccc} l & l & l \\ m_1 & m_2 & m_3 \end{array}\right) \\ \times \bar{Q}_{lm_1}\bar{Q}_{lm_2}\bar{Q}_{lm_3}.
84 \label{eq:third_inv}
85 \end{equation}
86 The factor in parentheses in Eq. \ref{eq:third_inv} is the Wigner-3$j$
87 symbol, and the sum is over all valid ($|m| \leq l$) values of $m_1$,
88 $m_2$, and $m_3$ which sum to zero.
89
90 \begin{table}
91 \caption{Values of bond orientational order parameters for
92 simple structures cooresponding to $l=4$ and $l=6$ spherical harmonic
93 functions.\cite{wolde:9932} $Q_4$ and $\hat{W}_4$ have values for {\it
94 individual} icosahedral clusters, but these values are not invariant
95 under rotations of the reference coordinate systems. Similar behavior
96 is observed in the bond-orientational order parameters for individual
97 liquid-like structures.}
98 \begin{center}
99 \begin{tabular}{ccccc}
100 \hline
101 \hline
102 & $Q_4$ & $Q_6$ & $\hat{W}_4$ & $\hat{W}_6$\\
103
104 fcc & 0.191 & 0.575 & -0.159 & -0.013\\
105
106 hcp & 0.097 & 0.485 & 0.134 & -0.012\\
107
108 bcc & 0.036 & 0.511 & 0.159 & 0.013\\
109
110 sc & 0.764 & 0.354 & 0.159 & 0.013\\
111
112 Icosahedral & - & 0.663 & - & -0.170\\
113
114 (liquid) & - & - & - & -\\
115 \hline
116 \end{tabular}
117 \end{center}
118 \label{table:bopval}
119 \end{table}
120
121 For ideal face-centered cubic ({\sc fcc}), body-centered cubic ({\sc
122 bcc}) and simple cubic ({\sc sc}) as well as hexagonally close-packed
123 ({\sc hcp}) structures, these rotationally invariant bond order
124 parameters have fixed values independent of the choice of coordinate
125 reference frames. For ideal icosahedral structures, the $l=6$
126 invariants, $Q_6$ and $\hat{W}_6$ are also independent of the
127 coordinate system. $Q_4$ and $\hat{W}_4$ will have non-vanishing
128 values for {\it individual} icosahedral clusters, but these values are
129 not invariant under rotations of the reference coordinate systems.
130 Similar behavior is observed in the bond-orientational order
131 parameters for individual liquid-like structures.
132
133 Additionally, both $Q_6$ and $\hat{W}_6$ are thought to have extreme
134 values for the icosahedral clusters.\cite{Steinhardt:1983mo} This
135 makes the $l=6$ bond-orientational order parameters particularly
136 useful in identifying the extent of local icosahedral ordering in
137 condensed phases. For example, a local structure which exhibits
138 $\hat{W}_6$ values near -0.17 is easily identified as an icosahedral
139 cluster and cannot be mistaken for distorted cubic or liquid-like
140 structures.
141
142 One may use these bond orientational order parameters as an averaged
143 property to obtain the extent of icosahedral ordering in a supercooled
144 liquid or cluster. It is also possible to accumulate information
145 about the {\it distributions} of local bond orientational order
146 parameters, $p(\hat{W}_6)$ and $p(Q_6)$, which provide information
147 about individual atomic sites that are central to local icosahedral
148 structures.
149
150 The distributions of atomic $Q_6$ and $\hat{W}_6$ values are plotted
151 as a function of temperature for our nanoparticles in figures
152 \ref{fig:q6} and \ref{fig:w6}. At high temperatures, the
153 distributions are unstructured and are broadly distributed across the
154 entire range of values. As the particles are cooled, however, there
155 is a dramatic increase in the fraction of atomic sites which have
156 local icosahedral ordering around them. (This corresponds to the
157 sharp peak appearing in figure \ref{fig:w6} at $\hat{W}_6=-0.17$ and
158 to the broad shoulder appearing in figure \ref{fig:q6} at $Q_6 =
159 0.663$.)
160
161 \begin{figure}[htbp]
162 \centering
163 \includegraphics[width=5in]{images/w6_stacked_plot.pdf}
164 \caption{Distributions of the bond orientational order parameter
165 ($\hat{W}_6$) at different temperatures. The upper, middle, and lower
166 panels are for 20, 30, and 40 \AA\ particles, respectively. The
167 left-hand column used cooling rates commensurate with a low
168 interfacial conductance ($87.5 \times 10^{6}$
169 $\mathrm{Wm^{-2}K^{-1}}$), while the right-hand column used a more
170 physically reasonable value of $117 \times 10^{6}$
171 $\mathrm{Wm^{-2}K^{-1}}$. The peak at $\hat{W}_6 \approx -0.17$ is
172 due to local icosahedral structures. The different curves in each of
173 the panels indicate the distribution of $\hat{W}_6$ values for samples
174 taken at different times along the cooling trajectory. The initial
175 and final temperatures (in K) are indicated on the plots adjacent to
176 their respective distributions.}
177 \label{fig:w6}
178 \end{figure}
179
180 \begin{figure}[htbp]
181 \centering
182 \includegraphics[width=5in]{images/q6_stacked_plot.pdf}
183 \caption{Distributions of the bond orientational order parameter
184 ($Q_6$) at different temperatures. The curves in the six panels in
185 this figure were computed at identical conditions to the same panels in
186 figure \ref{fig:w6}.}
187 \label{fig:q6}
188 \end{figure}
189
190 We have also calculated the fraction of atomic centers which have
191 strong local icosahedral order:
192 \begin{equation}
193 f_\textrm{icos} = \int_{-\infty}^{w_i} p(\hat{W}_6) d \hat{W}_6
194 \label{eq:ficos}
195 \end{equation}
196 where $w_i$ is a cutoff value in $\hat{W}_6$ for atomic centers that
197 are displaying icosahedral environments. We have chosen a (somewhat
198 arbitrary) value of $w_i= -0.15$ for the purposes of this work. A
199 plot of $f_\textrm{icos}(T)$ as a function of temperature of the
200 particles is given in figure \ref{fig:ficos}. As the particles cool,
201 the fraction of local icosahedral ordering rises smoothly to a plateau
202 value. The larger particles (particularly the ones that were cooled
203 in a lower viscosity solvent) show a slightly smaller tendency towards
204 icosahedral ordering.
205
206 \begin{figure}[htbp]
207 \centering
208 \includegraphics[width=5in]{images/fraction_icos.pdf}
209 \caption{Temperautre dependence of the fraction of atoms with local
210 icosahedral ordering, $f_\textrm{icos}(T)$ for 20, 30, and 40 \AA\
211 particles cooled at two different values of the interfacial
212 conductance.}
213 \label{fig:ficos}
214 \end{figure}
215
216 Since we have atomic-level resolution of the local bond-orientational
217 ordering information, we can also look at the local ordering as a
218 function of the identities of the central atoms. In figure
219 \ref{fig:AgVsCu} we display the distributions of $\hat{W}_6$ values
220 for both the silver and copper atoms, and we note a strong
221 predilection for the copper atoms to be central to icosahedra. This
222 is probably due to local packing competition of the larger silver
223 atoms around the copper, which would tend to favor icosahedral
224 structures over the more densely packed cubic structures.
225
226 \begin{figure}[htbp]
227 \centering
228 \includegraphics[width=5in]{images/w6_stacked_bytype_plot.pdf}
229 \caption{Distributions of the bond orientational order parameter
230 ($\hat{W}_6$) for the two different elements present in the
231 nanoparticles. This distribution was taken from the fully-cooled 40
232 \AA\ nanoparticle. Local icosahedral ordering around copper atoms is
233 much more prevalent than around silver atoms.}
234 \label{fig:AgVsCu}
235 \end{figure}
236
237 Additionally, we have observed that those silver atoms that {\it do}
238 form local icosahedral structures are usually on the surface of the
239 nanoparticle, while the copper atoms which have local icosahedral
240 ordering are distributed more evenly throughout the nanoparticles.
241 Figure \ref{fig:Surface} shows this tendency as a function of distance
242 from the center of the nanoparticle. Silver, since it has a lower
243 surface free energy than copper, tends to coat the skins of the mixed
244 particles.\cite{Zhu:1997lr} This is true even for bimetallic particles
245 that have been prepared in the Ag (core) / Cu (shell) configuration.
246 Upon forming a liquid droplet, approximately 1 monolayer of Ag atoms
247 will rise to the surface of the particles. This can be seen visually
248 in figure \ref{fig:cross_sections} as well as in the density plots in
249 the bottom panel of figure \ref{fig:Surface}. This observation is
250 consistent with previous experimental and theoretical studies on
251 bimetallic alloys composed of noble
252 metals.\cite{MainardiD.S._la0014306,HuangS.-P._jp0204206,Ramirez-Caballero:2006lr}
253 Bond order parameters for surface atoms are averaged only over the
254 neighboring atoms, so packing constraints that may prevent icosahedral
255 ordering around silver in the bulk are removed near the surface. It
256 would certainly be interesting to see if the relative tendency of
257 silver and copper to form local icosahedral structures in a bulk glass
258 differs from our observations on nanoparticles.
259
260 \begin{figure}[htbp]
261 \centering
262 \includegraphics[width=5in]{images/dens_fracr_stacked_plot.pdf}
263 \caption{Appearance of icosahedral clusters around central silver atoms
264 is largely due to the presence of these silver atoms at or near the
265 surface of the nanoparticle. The upper panel shows the fraction of
266 icosahedral atoms ($f_\textrm{icos}(r)$ for each of the two metallic
267 atoms as a function of distance from the center of the nanoparticle
268 ($r$). The lower panel shows the radial density of the two
269 constituent metals (relative to the overall density of the
270 nanoparticle). Icosahedral clustering around copper atoms are more
271 evenly distributed throughout the particle, while icosahedral
272 clustering around silver is largely confined to the silver atoms at
273 the surface.}
274 \label{fig:Surface}
275 \end{figure}