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1 %!TEX root = /Users/charles/Desktop/nanoglass/nanoglass.tex
2
3 \section{Analysis}
4
5 Frank first proposed local icosahedral ordering of atoms as an
6 explanation for supercooled atomic (specifically metallic) liquids,
7 and further showed that a 13-atom icosahedral cluster has a 8.4\%
8 higher binding energy the either a face centered cubic ({\sc fcc}) or
9 hexagonal close-packed ({\sc hcp}) crystal structures.\cite{19521106}
10 Icosahedra also have six five-fold symmetry axes that cannot be
11 extended indefinitely in three dimensions, which makes them long-range
12 translational order incommensurate with local icosahedral ordering.
13 This does not preclude icosahedral clusters from possessing long-range
14 {\it orientational} order. The ``frustrated'' packing of these
15 icosahedral structures into dense clusters has been proposed as a
16 model for glass formation.\cite{19871127} The size of the icosahedral
17 clusters is thought to increase until frustration prevents any further
18 growth.\cite{HOARE:1976fk} Molecular dynamics simulations of a
19 two-component Lennard-Jones glass showed that clusters of face-sharing
20 icosahedra are distributed throughout the
21 material.\cite{PhysRevLett.60.2295} Simulations of freezing of single
22 component metalic nanoclusters have shown a tendency for icosohedral
23 structure formation particularly at the surfaces of these
24 clusters.\cite{Gafner:2004bg,PhysRevLett.89.275502,Chen:2004ec}
25 Experimentally, the splitting (or shoulder) on the second peak of the
26 X-ray structure factor in binary metallic glasses has been attributed
27 to the formation of tetrahedra that share faces of adjoining
28 icosahedra.\cite{Waal:1995lr}
29
30 Various structural probes have been used to characterize structural
31 order in molecular systems including: common neighbor analysis,
32 Voronoi tesselations, and orientational bond-order
33 parameters.\cite{HoneycuttJ.Dana_j100303a014,Iwamatsu:2007lr,hsu:4974,nose:1803}
34 The method that has been used most extensively for determining local
35 and extended orientational symmetry in condensed phases is the
36 bond-orientational analysis formulated by Steinhart {\it et
37 al.}\cite{Steinhardt:1983mo} In this model, a set of spherical
38 harmonics is associated with each of the near neighbors of a central
39 atom. Neighbors (or ``bonds'') are defined as having a distance from
40 the central atom that is within the first peak in the radial
41 distribution function. The spherical harmonic between a central atom
42 $i$ and a neighboring atom $j$ is
43 \begin{equation}
44 Y_{lm}\left(\vec{r}_{ij}\right)=Y_{lm}\left(\theta(\vec{r}_{ij}),\phi(\vec{r}_{ij})\right)
45 \label{eq:spharm}
46 \end{equation}
47 where, $\{ Y_{lm}(\theta,\phi)\}$ are spherical harmonics, and
48 $\theta(\vec{r})$ and $\phi(\vec{r})$ are the polar and azimuthal
49 angles made by the bond vector $\vec{r}$ with respect to a reference
50 coordinate system. We chose for simplicity the origin as defined by
51 the coordinates for our nanoparticle. (Only even-$l$ spherical
52 harmonics are considered since permutation of a pair of identical
53 particles should not affect the bond-order parameter.) The local
54 environment surrounding atom $i$ can be defined by
55 the average over all neighbors, $N_b(i)$, surrounding that atom,
56 \begin{equation}
57 \bar{q}_{lm}(i) = \frac{1}{N_{b}(i)}\sum_{j=1}^{N_b(i)} Y_{lm}(\vec{r}_{ij}).
58 \label{eq:local_avg_bo}
59 \end{equation}
60 We can further define a global average orientational-bond order over
61 all $\bar{q}_{lm}$ by calculating the average of $\bar{q}_{lm}(i)$
62 over all $N$ particles
63 \begin{equation}
64 \bar{Q}_{lm} = \frac{\sum^{N}_{i=1}N_{b}(i)\bar{q}_{lm}(i)}{\sum^{N}_{i=1}N_{b}(i)}
65 \label{eq:sys_avg_bo}
66 \end{equation}
67 The $\bar{Q}_{lm}$ contained in equation \ref{eq:sys_avg_bo} is not
68 necessarily invariant under rotations of the arbitrary reference
69 coordinate system. Second- and third-order rotationally invariant
70 combinations, $Q_l$ and $W_l$, can be taken by summing over $m$ values
71 of $\bar{Q}_{lm}$,
72 \begin{equation}
73 Q_{l} = \left( \frac{4\pi}{2 l+1} \sum^{l}_{m=-l} \left| \bar{Q}_{lm} \right|^2\right)^{1/2}
74 \label{eq:sec_ord_inv}
75 \end{equation}
76 and
77 \begin{equation}
78 \hat{W}_{l} = \frac{W_{l}}{\left( \sum^{l}_{m=-l} \left| \bar{Q}_{lm} \right|^2\right)^{3/2}}
79 \label{eq:third_ord_inv}
80 \end{equation}
81 where
82 \begin{equation}
83 W_{l} = \sum_{\substack{m_1,m_2,m_3 \\m_1 + m_2 + m_3 = 0}} \left( \begin{array}{ccc} l & l & l \\ m_1 & m_2 & m_3 \end{array}\right) \\ \times \bar{Q}_{lm_1}\bar{Q}_{lm_2}\bar{Q}_{lm_3}.
84 \label{eq:third_inv}
85 \end{equation}
86 The factor in parentheses in Eq. \ref{eq:third_inv} is the Wigner-3$j$
87 symbol, and the sum is over all valid ($|m| \leq l$) values of $m_1$,
88 $m_2$, and $m_3$ which sum to zero.
89
90 \begin{table}
91 \caption{Values of bond orientational order parameters for
92 simple structures cooresponding to $l=4$ and $l=6$ spherical harmonic
93 functions.\cite{wolde:9932} $Q_4$ and $\hat{W}_4$ have values for {\it
94 individual} icosahedral clusters, but these values are not invariant
95 under rotations of the reference coordinate systems. Similar behavior
96 is observed in the bond-orientational order parameters for individual
97 liquid-like structures.}
98 \begin{center}
99 \begin{tabular}{ccccc}
100 \hline
101 \hline
102 & $Q_4$ & $Q_6$ & $\hat{W}_4$ & $\hat{W}_6$\\
103
104 fcc & 0.191 & 0.575 & -0.159 & -0.013\\
105
106 hcp & 0.097 & 0.485 & 0.134 & -0.012\\
107
108 bcc & 0.036 & 0.511 & 0.159 & 0.013\\
109
110 sc & 0.764 & 0.354 & 0.159 & 0.013\\
111
112 Icosahedral & - & 0.663 & - & -0.170\\
113
114 (liquid) & - & - & - & -\\
115 \hline
116 \end{tabular}
117 \end{center}
118 \label{table:bopval}
119 \end{table}
120
121 For ideal face-centered cubic ({\sc fcc}), body-centered cubic ({\sc
122 bcc}) and simple cubic ({\sc sc}) as well as hexagonally close-packed
123 ({\sc hcp}) structures, these rotationally invariant bond order
124 parameters have fixed values independent of the choice of coordinate
125 reference frames. For ideal icosahedral structures, the $l=6$
126 invariants, $Q_6$ and $\hat{W}_6$ are also independent of the
127 coordinate system. $Q_4$ and $\hat{W}_4$ will have non-vanishing
128 values for {\it individual} icosahedral clusters, but these values are
129 not invariant under rotations of the reference coordinate systems.
130 Similar behavior is observed in the bond-orientational order
131 parameters for individual liquid-like structures.
132
133 Additionally, both $Q_6$ and $\hat{W}_6$ are thought to have extreme
134 values for the icosahedral clusters.\cite{Steinhardt:1983mo} This
135 makes the $l=6$ bond-orientational order parameters particularly
136 useful in identifying the extent of local icosahedral ordering in
137 condensed phases. For example, a local structure which exhibits
138 $\hat{W}_6$ values near -0.17 is easily identified as an icosahedral
139 cluster and cannot be mistaken for distorted cubic or liquid-like
140 structures.
141
142 One may use these bond orientational order parameters as an averaged
143 property to obtain the extent of icosahedral ordering in a supercooled
144 liquid or cluster. It is also possible to accumulate information
145 about the {\it distributions} of local bond orientational order
146 parameters, $p(\hat{W}_6)$ and $p(Q_6)$, which provide information
147 about individual atomic sites that are central to local icosahedral
148 structures.
149
150 The distributions of atomic $Q_6$ and $\hat{W}_6$ values are plotted
151 as a function of temperature for our nanoparticles in figures
152 \ref{fig:q6} and \ref{fig:w6}. At high temperatures, the
153 distributions are unstructured and are broadly distributed across the
154 entire range of values. As the particles are cooled, however, there
155 is a dramatic increase in the fraction of atomic sites which have
156 local icosahedral ordering around them. (This corresponds to the
157 sharp peak appearing in figure \ref{fig:w6} at $\hat{W}_6=-0.17$ and
158 to the broad shoulder appearing in figure \ref{fig:q6} at $Q_6 =
159 0.663$.)
160
161 \begin{figure}[htbp]
162 \centering
163 \includegraphics[width=5in]{images/w6_stacked_plot.pdf}
164 \caption{Distributions of the bond orientational order parameter
165 ($\hat{W}_6$) at different temperatures. The upper, middle, and lower
166 panels are for 20, 30, and 40 \AA\ particles, respectively. The
167 left-hand column used cooling rates commensurate with a low
168 interfacial conductance ($87.5 \times 10^{6}$
169 $\mathrm{Wm^{-2}K^{-1}}$), while the right-hand column used a more
170 physically reasonable value of $117 \times 10^{6}$
171 $\mathrm{Wm^{-2}K^{-1}}$. The peak at $\hat{W}_6 \approx -0.17$ is
172 due to local icosahedral structures. The different curves in each of
173 the panels indicate the distribution of $\hat{W}_6$ values for samples
174 taken at different times along the cooling trajectory. The initial
175 and final temperatures (in K) are indicated on the plots adjacent to
176 their respective distributions.}
177 \label{fig:w6}
178 \end{figure}
179
180 \begin{figure}[htbp]
181 \centering
182 \includegraphics[width=5in]{images/q6_stacked_plot.pdf}
183 \caption{Distributions of the bond orientational order parameter
184 ($Q_6$) at different temperatures. The curves in the six panels in
185 this figure were computed at identical conditions to the same panels in
186 figure \ref{fig:w6}.}
187 \label{fig:q6}
188 \end{figure}
189
190 The probability distributions of local order can be used to generate
191 free energy surfaces using the local orientational ordering as a
192 reaction coordinate. By making the simple statistical equivalence
193 between the free energy and the probabilities of occupying certain
194 states,
195 \begin{equation}
196 g(\hat{W}_6) = - k_B T \ln p(\hat{W}_6),
197 \end{equation}
198 we can obtain a sequence of free energy surfaces (as a function of
199 temperature) for the local ordering around central atoms within our
200 particles. Free energy surfaces for the 40 \AA\ particle at a range
201 of temperatures are shown in figure \ref{fig:freeEnergy}. Note that
202 at all temperatures, the liquid-like structures are global minima on
203 the free energy surface, while the local icosahedra appear as local
204 minima once the temperature has fallen below 528 K. As the
205 temperature falls, it is possible for substructures to become trapped
206 in the local icosahedral well, and if the cooling is rapid enough,
207 this trapping leads to vitrification. A similar analysis of the free
208 energy surface for orientational order in bulk glass formers can be
209 found in the work of van~Duijneveldt and
210 Frenkel.\cite{duijneveldt:4655}
211
212 \begin{figure}[htbp]
213 \centering
214 \includegraphics[width=5in]{images/freeEnergyVsW6.pdf}
215 \caption{Free energy as a function of the orientational order
216 parameter ($\hat{W}_6$) for 40 \AA bimetallic nanoparticles as they
217 are cooled from 902 K to 310 K. As the particles cool below 528 K, a
218 local minimum in the free energy surface appears near the perfect
219 icosahedral ordering ($\hat{W}_6 = -0.17$). At all temperatures,
220 liquid-like structures are a global minimum on the free energy
221 surface, but if the cooling rate is fast enough, substructures
222 may become trapped with local icosahedral order, leading to the
223 formation of a glass.}
224 \label{fig:freeEnergy}
225 \end{figure}
226
227 We have also calculated the fraction of atomic centers which have
228 strong local icosahedral order:
229 \begin{equation}
230 f_\textrm{icos} = \int_{-\infty}^{w_i} p(\hat{W}_6) d \hat{W}_6
231 \label{eq:ficos}
232 \end{equation}
233 where $w_i$ is a cutoff value in $\hat{W}_6$ for atomic centers that
234 are displaying icosahedral environments. We have chosen a (somewhat
235 arbitrary) value of $w_i= -0.15$ for the purposes of this work. A
236 plot of $f_\textrm{icos}(T)$ as a function of temperature of the
237 particles is given in figure \ref{fig:ficos}. As the particles cool,
238 the fraction of local icosahedral ordering rises smoothly to a plateau
239 value. The larger particles (particularly the ones that were cooled
240 in a lower viscosity solvent) show a slightly smaller tendency towards
241 icosahedral ordering.
242
243 \begin{figure}[htbp]
244 \centering
245 \includegraphics[width=5in]{images/fraction_icos.pdf}
246 \caption{Temperautre dependence of the fraction of atoms with local
247 icosahedral ordering, $f_\textrm{icos}(T)$ for 20, 30, and 40 \AA\
248 particles cooled at two different values of the interfacial
249 conductance.}
250 \label{fig:ficos}
251 \end{figure}
252
253 Since we have atomic-level resolution of the local bond-orientational
254 ordering information, we can also look at the local ordering as a
255 function of the identities of the central atoms. In figure
256 \ref{fig:AgVsCu} we display the distributions of $\hat{W}_6$ values
257 for both the silver and copper atoms, and we note a strong
258 predilection for the copper atoms to be central to icosahedra. This
259 is probably due to local packing competition of the larger silver
260 atoms around the copper, which would tend to favor icosahedral
261 structures over the more densely packed cubic structures.
262
263 \begin{figure}[htbp]
264 \centering
265 \includegraphics[width=5in]{images/w6_stacked_bytype_plot.pdf}
266 \caption{Distributions of the bond orientational order parameter
267 ($\hat{W}_6$) for the two different elements present in the
268 nanoparticles. This distribution was taken from the fully-cooled 40
269 \AA\ nanoparticle. Local icosahedral ordering around copper atoms is
270 much more prevalent than around silver atoms.}
271 \label{fig:AgVsCu}
272 \end{figure}
273
274 The locations of these icosahedral centers are not uniformly
275 distrubted throughout the particles. In figure \ref{fig:icoscluster}
276 we show snapshots of the centers of the local icosahedra (i.e. any
277 atom which exhibits a local bond orientational order parameter
278 $\hat{W}_6 < -0.15$). At high temperatures, the icosahedral centers
279 are transitory, existing only for a few fs before being reabsorbed
280 into the liquid droplet. As the particle cools, these centers become
281 fixed at certain locations, and additional icosahedra develop
282 throughout the particle, clustering around the sites where the
283 structures originated. There is a strong preference for icosahedral
284 ordering near the surface of the particles. Identification of these
285 structures by the type of atom shows that the silver-centered
286 icosahedra are evident only at the surface of the particles.
287
288 \begin{figure}[htbp]
289 \centering
290 \begin{tabular}{c c c}
291 \includegraphics[width=2.1in]{images/Cu_Ag_random_30A_liq_icosonly.pdf}
292 \includegraphics[width=2.1in]{images/Cu_Ag_random_30A__0007_icosonly.pdf}
293 \includegraphics[width=2.1in]{images/Cu_Ag_random_30A_glass_icosonly.pdf}
294 \end{tabular}
295 \caption{Centers of local icosahedral order ($\hat{W}_6<0.15$) at 900
296 K, 471 K and 315 K for the 30 \AA\ nanoparticle cooled with an
297 interfacial conductance $G = 87.5 \times 10^{6}$
298 $\mathrm{Wm^{-2}K^{-1}}$. Silver atoms (blue) exhibit icosahedral
299 order at the surface of the nanoparticle while copper icosahedral
300 centers (green) are distributed throughout the nanoparticle. The
301 icosahedral centers appear to cluster together and these clusters
302 increase in size with decreasing temperature.}
303 \label{fig:icoscluster}
304 \end{figure}
305
306 Additionally, we have observed that those silver atoms that {\it do}
307 form local icosahedral structures are usually on the surface of the
308 nanoparticle, while the copper atoms which have local icosahedral
309 ordering are distributed more evenly throughout the nanoparticles.
310 Figure \ref{fig:Surface} shows this tendency as a function of distance
311 from the center of the nanoparticle. Silver, since it has a lower
312 surface free energy than copper, tends to coat the skins of the mixed
313 particles.\cite{Zhu:1997lr} This is true even for bimetallic particles
314 that have been prepared in the Ag (core) / Cu (shell) configuration.
315 Upon forming a liquid droplet, approximately 1 monolayer of Ag atoms
316 will rise to the surface of the particles. This can be seen visually
317 in figure \ref{fig:cross_sections} as well as in the density plots in
318 the bottom panel of figure \ref{fig:Surface}. This observation is
319 consistent with previous experimental and theoretical studies on
320 bimetallic alloys composed of noble
321 metals.\cite{MainardiD.S._la0014306,HuangS.-P._jp0204206,Ramirez-Caballero:2006lr}
322 Bond order parameters for surface atoms are averaged only over the
323 neighboring atoms, so packing constraints that may prevent icosahedral
324 ordering around silver in the bulk are removed near the surface. It
325 would certainly be interesting to see if the relative tendency of
326 silver and copper to form local icosahedral structures in a bulk glass
327 differs from our observations on nanoparticles.
328
329 \begin{figure}[htbp]
330 \centering
331 \includegraphics[width=5in]{images/dens_fracr_stacked_plot.pdf}
332 \caption{Appearance of icosahedral clusters around central silver atoms
333 is largely due to the presence of these silver atoms at or near the
334 surface of the nanoparticle. The upper panel shows the fraction of
335 icosahedral atoms ($f_\textrm{icos}(r)$ for each of the two metallic
336 atoms as a function of distance from the center of the nanoparticle
337 ($r$). The lower panel shows the radial density of the two
338 constituent metals (relative to the overall density of the
339 nanoparticle). Icosahedral clustering around copper atoms are more
340 evenly distributed throughout the particle, while icosahedral
341 clustering around silver is largely confined to the silver atoms at
342 the surface.}
343 \label{fig:Surface}
344 \end{figure}