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Revision 3225 by chuckv, Tue Sep 11 15:23:24 2007 UTC vs.
Revision 3226 by chuckv, Wed Sep 19 16:53:58 2007 UTC

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1  
2 < %% Created for Charles Vardeman at 2007-09-10 16:34:07 -0400
2 > %% Created for Charles Vardeman at 2007-09-18 19:11:55 -0400
3  
4  
5   %% Saved with string encoding Western (ASCII)
6 +
7 +
8 +
9 + @article{235821,
10 +        Address = {New York, NY, USA},
11 +        Author = {C. Bradford Barber and David P. Dobkin and Hannu Huhdanpaa},
12 +        Date-Added = {2007-09-18 19:11:42 -0400},
13 +        Date-Modified = {2007-09-18 19:11:50 -0400},
14 +        Doi = {http://doi.acm.org/10.1145/235815.235821},
15 +        Issn = {0098-3500},
16 +        Journal = {ACM Trans. Math. Softw.},
17 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/p469-barber.pdf},
18 +        Number = {4},
19 +        Pages = {469--483},
20 +        Publisher = {ACM Press},
21 +        Title = {The quickhull algorithm for convex hulls},
22 +        Volume = {22},
23 +        Year = {1996}}
24 +
25 + @article{0031-9155-41-9-016,
26 +        Abstract = {Volume measurements are useful in many branches of science and medicine. They are usually accomplished by acquiring a sequence of cross sectional images through the object using an appropriate scanning modality, for example x-ray computed tomography (CT), magnetic resonance (MR) or ultrasound (US). In the cases of CT and MR, a dividing cubes algorithm can be used to describe the surface as a triangle mesh. However, such algorithms are not suitable for US data, especially when the image sequence is multiplanar (as it usually is). This problem may be overcome by manually tracing regions of interest (ROIs) on the registered multiplanar images and connecting the points into a trianglar mesh. In this paper we describe and evaluate a new discreet form of Gauss' theorem which enables the calculation of the volume of any enclosed surface described by a triangular mesh. The volume is calculated by summing the vector product of the centroid, area and normal of each surface triangle. The algorithm was tested on computer-generated objects, US-scanned balloons, livers and kidneys and CT-scanned clay rocks. The results, expressed as the mean percentage difference one standard deviation were , , and \% for balloons, livers, kidneys and rocks respectively. The results compare favourably with other volume estimation methods such as planimetry and tetrahedral decomposition.},
27 +        Author = {S W Hughes, T J D'Arcy, D J Maxwell, J E Saunders, C F Ruff, W S C Chiu and R J Sheppard},
28 +        Date-Added = {2007-09-18 18:49:49 -0400},
29 +        Date-Modified = {2007-09-18 18:49:55 -0400},
30 +        Journal = {Physics in Medicine and Biology},
31 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/m60915.pdf},
32 +        Number = {9},
33 +        Pages = {1809-1821},
34 +        Title = {Application of a new discreet form of Gauss' theorem for measuring volume},
35 +        Url = {http://stacks.iop.org/0031-9155/41/1809},
36 +        Volume = {41},
37 +        Year = {1996}}
38 +
39 + @article{Balucani:1990fk,
40 +        Author = {Balucani, U. and Vallauri, R.},
41 +        Date-Added = {2007-09-18 11:47:47 -0400},
42 +        Date-Modified = {2007-09-18 11:48:01 -0400},
43 +        Journal = {Chemical Physics Letters},
44 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/sdarticle0.pdf},
45 +        Number = {1},
46 +        Pages = {77--81},
47 +        Title = {Evolution of bond-angle distribution from liquid to glassy states},
48 +        Ty = {JOUR},
49 +        Url = {http://www.sciencedirect.com/science/article/B6TFN-44XDV0S-9H/2/fa1467fe68d6474b775de0f4cfd7f7ab},
50 +        Volume = {166},
51 +        Year = {1990}}
52 +
53 + @article{Sheng:2006lr,
54 +        Annote = {10.1038/nature04421},
55 +        Author = {Sheng, H. W. and Luo, W. K. and Alamgir, F. M. and Bai, J. M. and Ma, E.},
56 +        Date-Added = {2007-09-17 12:50:02 -0400},
57 +        Date-Modified = {2007-09-17 12:50:07 -0400},
58 +        Isbn = {0028-0836},
59 +        Journal = {Nature},
60 +        L3 = {http://www.nature.com/nature/journal/v439/n7075/suppinfo/nature04421_S1.html},
61 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/nature04421.pdf},
62 +        M3 = {10.1038/nature04421},
63 +        Number = {7075},
64 +        Pages = {419--425},
65 +        Title = {Atomic packing and short-to-medium-range order in metallic glasses},
66 +        Ty = {JOUR},
67 +        Url = {http://dx.doi.org/10.1038/nature04421},
68 +        Volume = {439},
69 +        Year = {2006}}
70 +
71 + @article{19521106,
72 +        Author = {Frank, F. C.},
73 +        Copyright = {Copyright 1952 The Royal Society},
74 +        Date-Added = {2007-09-17 12:26:50 -0400},
75 +        Date-Modified = {2007-09-17 12:26:56 -0400},
76 +        Group = {A Discussion on Theory of Liquids},
77 +        Issn = {0080-4630},
78 +        Journal = {Proceedings of the Royal Society of London. Series A, Mathematical and Physical Sciences},
79 +        Jstor_Articletype = {Full Length Article},
80 +        Jstor_Date = {19521106},
81 +        Jstor_Formatteddate = {Nov. 6, 1952},
82 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/frank_icos_liq.pdf},
83 +        Month = {nov},
84 +        Number = {1120},
85 +        Pages = {43--46},
86 +        Publisher = {The Royal Society},
87 +        Title = {Supercooling of Liquids},
88 +        Url = {http://links.jstor.org/sici?sici=0080-4630%2819521106%29215%3A1120%3C43%3ASOL%3E2.0.CO%3B2-9},
89 +        Volume = {215},
90 +        Year = {1952}}
91  
92 + @article{PhysRevLett.91.135505,
93 +        Author = {Di Cicco, Andrea and Trapananti, Angela and Faggioni, Silena and Filipponi, Adriano},
94 +        Date-Added = {2007-09-17 12:15:58 -0400},
95 +        Date-Modified = {2007-09-17 12:16:09 -0400},
96 +        Doi = {10.1103/PhysRevLett.91.135505},
97 +        Journal = {Phys. Rev. Lett.},
98 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/e135505.pdf},
99 +        Month = {Sep},
100 +        Number = {13},
101 +        Numpages = {4},
102 +        Pages = {135505},
103 +        Publisher = {American Physical Society},
104 +        Title = {Is There Icosahedral Ordering in Liquid and Undercooled Metals?},
105 +        Volume = {91},
106 +        Year = {2003}}
107  
108 + @article{duijneveldt:4655,
109 +        Author = {J. S. van Duijneveldt and D. Frenkel},
110 +        Date-Added = {2007-09-13 16:50:13 -0400},
111 +        Date-Modified = {2007-09-13 16:50:22 -0400},
112 +        Doi = {10.1063/1.462802},
113 +        Journal = {The Journal of Chemical Physics},
114 +        Keywords = {COMPUTERIZED SIMULATION; FREE ENERGY; CRYSTALS; NUCLEATION; THERMAL BARRIERS; MONTE CARLO METHOD; SUPERCOOLED LIQUIDS; FCC LATTICES; BCC LATTICES; SIMULATION; HOMOGENEITY},
115 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/JChemPhys_96_4655.pdf},
116 +        Number = {6},
117 +        Pages = {4655-4668},
118 +        Publisher = {AIP},
119 +        Title = {Computer simulation study of free energy barriers in crystal nucleation},
120 +        Url = {http://link.aip.org/link/?JCP/96/4655/1},
121 +        Volume = {96},
122 +        Year = {1992}}
123 +
124 + @article{Jiang:2005lr,
125 +        Author = {Hongjin Jiang and Kyoung-sik Moon and Wong, C. P.},
126 +        Date-Added = {2007-09-11 14:55:57 -0400},
127 +        Date-Modified = {2007-09-11 14:56:06 -0400},
128 +        Isbn = {1550-5723},
129 +        Journal = {Advanced Packaging Materials: Processes, Properties and Interfaces, 2005. Proceedings. International Symposium on},
130 +        Journal1 = {Advanced Packaging Materials: Processes, Properties and Interfaces, 2005. Proceedings. International Symposium on},
131 +        Keywords = {adhesives; conducting polymers; copper alloys; filled polymers; filler metals; integrated circuit interconnections; materials preparation; nanoparticles; powder technology; powders; silver alloys; Ag-Cu alloy nanoparticle synthesis; AgCu; TEM observation; UV absorption; conductive filler; electrically conductive adhesive; lead-free interconnect material; mixed alloy structure; polyol process; silver-copper alloy},
132 +        Local-Url = {file://localhost/Users/charles/Documents/Papers/01432072.pdf},
133 +        Pages = {173--177},
134 +        Title = {Synthesis of Ag-Cu alloy nanoparticles for lead-free interconnect materials},
135 +        Title1 = {Advanced Packaging Materials: Processes, Properties and Interfaces, 2005. Proceedings. International Symposium on},
136 +        Ty = {CONF},
137 +        Year = {2005}}
138  
139   @unpublished{hartlandPrv2007,
140          Author = {G. V. Hartland},
# Line 1907 | Line 2037
2037                  <key>group name</key>
2038                  <string>Icosahedral Order</string>
2039                  <key>keys</key>
2040 <                <string>ganesh-2006-</string>
2040 >                <string>19521106,Balucani:1990fk,ganesh-2006-,PhysRevLett.91.135505</string>
2041          </dict>
2042          <dict>
2043                  <key>group name</key>
# Line 1935 | Line 2065
2065          </dict>
2066          <dict>
2067                  <key>group name</key>
2068 +                <string>NPT Langevin</string>
2069 +                <key>keys</key>
2070 +                <string>calvo:125414,Kohanoff:2005,0953-8984-18-39-037,0031-9155-41-9-016,Buscaglia:1997fk,0953-8984-14-26-101,Baltazar:2006lr</string>
2071 +        </dict>
2072 +        <dict>
2073 +                <key>group name</key>
2074                  <string>Pair Analysis</string>
2075                  <key>keys</key>
2076                  <string>Miracle:2006qy,Iwamatsu:2007lr,HoneycuttJ.Dana_j100303a014,PhysRevLett.60.2295</string>

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