--- trunk/nonperiodicVSS/nonperiodicVSS.tex	2013/08/05 21:31:30	3931
+++ trunk/nonperiodicVSS/nonperiodicVSS.tex	2013/08/06 21:44:34	3932
@@ -164,8 +164,7 @@ Gold Nanoparticle:\\
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 \subsection{Thermal conductivities}
 
-Gold Nanoparticle:\\
-Measured linear slope $\left( \langle dT / dr \rangle \right)$ is linearly dependent on applied kinetic energy flux. Calculated thermal conductivity compares well with previous bulk QSC values. Still $\sim$100 times lower than experiment (limitations of potential -- neglects electronic contributions to heat conduction). Increase relative to bulk may be due to slight increase in gold density. Curvature of nanoparticle introduces higher surface tension and increases density of gold.\\
+Calculated values for the thermal conductivity of a 40 \AA$~$ radius gold nanoparticle (15707 atoms) at different kinetic energy flux values are shown in Table \ref{table:goldconductivity}. For these calculations, the hot and cold slabs were excluded from the linear regression of the thermal gradient. The measured linear slope $\langle dT / dr \rangle$ is linearly dependent on the applied kinetic energy flux $J_r$. Calculated thermal conductivity values compare well with previous bulk QSC values of 1.08 - 1.26 W m$^{-1}$ K$^{-1}$ [cite NIVS paper], though still significantly lower than the experimental value of 320 W m$^{-1}$ K$^{-1}$, as the QSC force field neglects significant electronic contributions to heat conduction. The small increase relative to previous simulated bulk values is due to a slight increase in gold density -- as expected, an increase in density results in higher thermal conductivity values. The increased density is a result of nanoparticle curvature relative to an infinite bulk slab, which introduces surface tension that increases ambient density.
 
 \begin{longtable}{p{2.7cm} p{2.5cm} p{2.5cm}}
 	\caption{Calculated thermal conductivity of a crystalline gold nanoparticle of radius 40 \AA. Calculations were performed at 300 K and ambient density. Gold-gold interactions are described by the Quantum Sutton-Chen potential.}
\ No newline at end of file
@@ -218,9 +217,24 @@ Gold Nanoparticle and Ellipsoid in Hexane:
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
 \subsection{Interfacial friction}
 
-Gold Nanoparticle and Ellipsoid in Hexane:
+Table \ref{table:interfacialfriction} gives the calculated interfacial friction coefficients $\kappa$ for a spherical gold nanoparticle and prolate ellipsoidal gold nanorod in TraPPE-UA hexane. An angular momentum flux was applied between the A and B regions defined as the gold structure and hexane molecules included in the convex hull, respectively. The resulting angular velocity gradient resulted in the gold structure rotating about the prescribed axis within the solvent.
 
-\begin{longtable}{p{2.5cm} p{3cm} p{2.5cm} p{2.5cm} p{2.5cm}}
+Analytical solutions for the rotational friction coefficients for a solvated spherical body of radius $r$ under ``stick'' boundary conditions can be estimated using Stokes' law
+
+\begin{equation}
+	f_r = 8 \pi \eta r^3 \label{eq:fr}.
+\end{equation}
+
+For general ellipsoids with semiaxes $a$, $b$, and $c$, Perrin's extension of Stokes' law provides exact solutions for prolate $(a \geq b = c)$ and oblate $(a < b = c)$ ellipsoids. For a prolate ellipsoidal rod, demonstrated here, 
+
+\begin{eqnarray}
+	f_a = \label{eq:fa}\\
+	f_b = f_c = \label{eq:fb}
+\end{eqnarray}
+
+The dynamic viscosity of the solvent, $\eta$, was calculated by applying a linear momentum flux to a periodic box of TraPPE-UA hexane.
+
+\begin{longtable}{p{3.8cm} p{3cm} p{2.8cm} p{2.5cm} p{2.5cm}}
 	\caption{Calculated interfacial friction coefficients ($\kappa$) and slip length ($\delta$) of gold nanostructures solvated in TraPPE-UA hexane. The ellipsoid is oriented with the long axis along the $z$ direction.}
 	\\ \hline \hline
 		{Structure} & \centering{Axis of rotation} & \centering\arraybackslash {$\kappa$} & \centering\arraybackslash {$\delta$} & \centering\arraybackslash Stokes' Law $F$\\ 
\ No newline at end of file
@@ -229,8 +243,8 @@ Ellipsoidal rod & \centering$x = y$ & & & \\
 \hline
 % \endfoot
 Nanoparticle & \centering$x = y = z$ & & & \\
-Ellipsoidal rod & \centering$x = y$ & & & \\
-Ellipsoidal rod & \centering$z$ & & &
+Prolate Ellipsoidal rod & \centering$x = y$ & & & \\
+Prolate Ellipsoidal rod & \centering$z$ & & &
 \\ \hline \hline
 \label{table:interfacialfriction}
 \end{longtable}
\ No newline at end of file
