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# User Rev Content
1 mmeineke 662 @string{jcp = "J. Chem. Phys."}
2     @string{cpl = "Chem. Phys. Lett."}
3     @string{jpc = "J. Phys. Chem."}
4     @string{jpcA = "J. Phys. Chem. A"}
5     @string{jpcB = "J. Phys. Chem. B"}
6     @string{cp = "Chem. Phys."}
7     @string{acp = "Adv. Chem. Phys."}
8     @string{pra = "Phys. Rev. A"}
9     @string{prb = "Phys. Rev. B"}
10     @string{pre = "Phys. Rev. E"}
11     @string{prl = "Phys. Rev. Lett."}
12     @string{rmp = "Rev. Mod. Phys."}
13     @string{jml = "J. Mol. Liq."}
14     @string{mp = "Mol. Phys."}
15     @string{pnas = "Proc. Natl. Acad. Sci. USA"}
16     @string{jacs = "J. Am. Chem. Soc."}
17    
18     @Book{Berne90,
19     author = {B.~J. Berne and R. Pecora},
20     title = {Dynamic Light Scattering},
21     publisher = {Robert E. Krieger Publishing Company, Inc.},
22     year = 1990,
23     address = {Malabar, Florida}
24     }
25    
26     @Article{Evans77,
27     author = {D.~J. Evans},
28     title = {On the representation of orientation space},
29     journal = {Mol. Phys.},
30     year = 1977,
31     volume = 34,
32     pages = {317-325}
33     }
34    
35     @Article{Tuckerman92,
36     author = {M. Tuckerman and B.~J. Berne and G.~J. Martyna},
37     title = {Reversible multiple time scale molecular dynamics},
38     journal = jcp,
39     year = 1992,
40     volume = 97,
41     pages = {1990-2001}
42     }
43    
44     @Book{Hansen86,
45     author = {J.~P. Hansen and I.~R. McDonald},
46     title = {Theory of Simple Liquids},
47     chapter = 7,
48     publisher = {Academic Press},
49     year = 1986,
50     address = {London},
51     pages = {199-206}
52     }
53    
54     @Article{Angelani98,
55     author = {L. Angelani and G. Parisi and G. Ruocco and G. Viliani},
56     title = {Connected Network of Minima as a Model Glass: Long
57     Time Dynamics},
58     journal = prl,
59     year = 1998,
60     volume = 81,
61     number = 21,
62     pages = {4648-4651}
63     }
64    
65     @Article{Stillinger82,
66     author = {F.~H. Stillinger and T.~A. Weber},
67     title = {Hidden structure in liquids},
68     journal = pra,
69     year = 1982,
70     volume = 25,
71     number = 2,
72     pages = {978-989}
73     }
74    
75     @Article{Stillinger83,
76     author = {F.~H. Stillinger and T.~A. Weber},
77     title = {Dynamics of structural transitions in liquids},
78     journal = pra,
79     year = 1983,
80     volume = 28,
81     number = 4,
82     pages = {2408-2416}
83     }
84    
85     @Article{Weber84,
86     author = {T.~A. Weber and F.~H. Stillinger},
87     title = {The effect of density on the inherent structure in
88     liquids},
89     journal = jcp,
90     year = 1984,
91     volume = 80,
92     number = 6,
93     pages = {2742-2746}
94     }
95    
96     @Article{Stillinger85,
97     author = {F.~H. Stillinger and T.~A. Weber},
98     title = {Inherent structure theory of liquids in the
99     hard-sphere limit},
100     journal = jcp,
101     year = 1985,
102     volume = 83,
103     number = 9,
104     pages = {4767-4775}
105     }
106    
107     @Article{Stillinger98,
108     author = {S. Sastry and P.~G. Debenedetti and F.~H. Stillinger},
109     title = {Signatures of distinct dynamical regimes in the
110     energy landscape of a glass-forming liquid},
111     journal = {Nature},
112     year = 1998,
113     volume = 393,
114     pages = {554-557}
115     }
116    
117    
118     @Article{Parkhurst75a,
119     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
120     title = {Dense liquids. I. The effect of density and
121     temperature on viscosity of tetramethylsilane and
122     benzene-$\mbox{D}_6$},
123     journal = jcp,
124     year = 1975,
125     volume = 63,
126     number = 6,
127     pages = {2698-2704}
128     }
129    
130     @Article{Parkhurst75b,
131     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
132     title = {Dense liquids. II. The effect of density and
133     temperature on viscosity of tetramethylsilane and
134     benzene },
135     journal = jcp,
136     year = 1975,
137     volume = 63,
138     number = 6,
139     pages = {2705-2709}
140     }
141    
142     @Article{Forester97,
143     author = {T.~R. Forester and W. Smith and J.~H.~R. Clarke},
144     title = {Antibiotic activity of valinomycin - Molecular
145     dynamics simulations involving the water/membrane
146     interface},
147     journal = {J. Chem. Soc. - Faraday Transactions},
148     year = 1997,
149     volume = 93,
150     pages = {613-619}
151     }
152    
153     @Article{Tieleman98,
154     author = {D.~P. Tieleman and H.~J.~C. Berendsen},
155     title = {A molecular dynamics study of the pores formed by
156     Escherichia coli OmpF porin in a fully hydrated
157     palmitoyloleoylphosphatidylcholine bilayer},
158     journal = {Biophys. J.},
159     year = 1998,
160     volume = 74,
161     pages = {2786-2801}
162     }
163    
164     @Article{Cascales98,
165     author = {J.~J.~L. Cascales and J.~G.~H. Cifre and J.~G. de~la~Torre},
166     title = {Anaesthetic mechanism on a model biological
167     membrane: A molecular dynamics simulation study},
168     journal = {J. Phys. Chem. B},
169     year = 1998,
170     volume = 102,
171     pages = {625-631}
172     }
173    
174     @Article{Bassolino95,
175     author = {D. Bassolino and H.~E. Alper and T.~R. Stouch},
176     title = {MECHANISM OF SOLUTE DIFFUSION THROUGH LIPID
177     BILAYER-MEMBRANES BY MOLECULAR-DYNAMICS SIMULATION},
178     journal = {J. Am. Chem. Soc.},
179     year = 1995,
180     volume = 117,
181     pages = {4118-4129}
182     }
183    
184     @Article{Alper95,
185     author = {H.~E. Alper and T.~R. Stouch},
186     title = {ORIENTATION AND DIFFUSION OF A DRUG ANALOG IN
187     BIOMEMBRANES - MOLECULAR-DYNAMICS SIMULATIONS},
188     journal = {J. Phys. Chem.},
189     year = 1995,
190     volume = 99,
191     pages = {5724-5731}
192     }
193    
194     @Article{Sok92,
195     author = {R.~M. Sok and H.~J.~C. Berendsen and W.~F. van~Gunsteren},
196     title = {MOLECULAR-DYNAMICS SIMULATION OF THE TRANSPORT OF
197     SMALL MOLECULES ACROSS A POLYMER MEMBRANE},
198     journal = {J. Chem. Phys.},
199     year = 1992,
200     volume = 96,
201     pages = {4699-4704}
202     }
203    
204     @Article{Rabani99,
205     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
206     title = {Direct Observation of Stretched-Exponential
207     Relaxation in Low-Temperature Lennard-Jones Systems
208     Using the Cage Correlation Function},
209     journal = prl,
210     year = {1999},
211     volume = 82,
212     pages = {3649}
213     }
214    
215     @Article{Rabani97,
216     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
217     title = {Calculating the hopping rate for self-diffusion on
218     rough potential energy surfaces: Cage correlations},
219     journal = {J. Chem. Phys.},
220     year = 1997,
221     volume = 107,
222     pages = {6867-6876}
223     }
224    
225     @Article{Gezelter99,
226     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
227     title = {Methods for calculating the hopping rate for
228     orientational and spatial diffusion in a molecular
229     liquid: $\mbox{CS}_{2}$},
230     journal = jcp,
231     year = 1999,
232     volume = 110,
233     pages = 3444
234     }
235    
236     @Article{Gezelter98a,
237     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
238     title = {Response to 'Comment on a Critique of the
239     Instantaneous Normal Mode (INM) Approach to
240     Diffusion'},
241     journal = jcp,
242     year = 1998,
243     volume = 109,
244     pages = 4695
245     }
246    
247     @Article{Gezelter97,
248     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
249     title = {Can imaginary instantaneous normal mode frequencies
250     predict barriers to self-diffusion?},
251     journal = jcp,
252     year = 1997,
253     volume = 107,
254     pages = 4618
255     }
256    
257     @Article{Zwanzig83,
258     author = {R. Zwanzig},
259     title = {On the relation between self-diffusion and viscosity
260     of liquids},
261     journal = jcp,
262     year = 1983,
263     volume = 79,
264     pages = {4507-4508}
265     }
266    
267     @Article{Zwanzig88,
268     author = {R. Zwanzig},
269     title = {Diffusion in rough potential},
270     journal = {Proc. Natl. Acad. Sci. USA},
271     year = 1988,
272     volume = 85,
273     pages = 2029
274     }
275    
276     @Article{Stillinger95,
277     author = {F.~H. Stillinger},
278     title = {A Topographic View of Supercooled Liquids and Glass
279     Formation},
280     journal = {Science},
281     year = 1995,
282     volume = 267,
283     pages = {1935-1939}
284     }
285    
286     @InCollection{Angell85,
287     author = {C.~A. Angell},
288     title = {unknown},
289     booktitle = {Relaxations in Complex Systems},
290     publisher = {National Technical Information Service,
291     U.S. Department of Commerce},
292     year = 1985,
293     editor = {K.~Ngai and G.~B. Wright},
294     address = {Springfield, VA},
295     pages = 1
296     }
297    
298     @Article{Bembenek96,
299     author = {S.~D. Bembenek and B.~B. Laird},
300     title = {The role of localization in glasses and supercooled liquids},
301     journal = jcp,
302     year = 1996,
303     volume = 104,
304     pages = 5199
305     }
306    
307     @Article{Sun97,
308     author = {X. Sun and W.~H. Miller},
309     title = {Semiclassical initial value representation for
310     electronically nonadiabatic molecular dynamics},
311     journal = jcp,
312     year = 1997,
313     volume = 106,
314     pages = 6346
315     }
316    
317     @Article{Spath96,
318     author = {B.~W. Spath and W.~H. Miller},
319     title = {SEMICLASSICAL CALCULATION OF CUMULATIVE REACTION
320     PROBABILITIES},
321     journal = jcp,
322     year = 1996,
323     volume = 104,
324     pages = 95
325     }
326    
327     @Book{Warshel91,
328     author = {Arieh Warshel},
329     title = {Computer modeling of chemical reactions in enzymes
330     and solutions},
331     publisher = {Wiley},
332     year = 1991,
333     address = {New York}
334     }
335    
336     @Article{Vuilleumier97,
337     author = {Rodolphe Vuilleumier and Daniel Borgis},
338     title = {Molecular Dynamics of an excess proton in water
339     using a non-additive valence bond force field},
340     journal = jpc,
341     year = 1997,
342     volume = {in press}
343     }
344    
345     @Article{Kob95a,
346     author = {W. Kob and H.~C. Andersen},
347     title = {Testing mode-coupling theory for a supercooled
348     binary Lennard-Jones mixtures: The van Hove
349     corraltion function},
350     journal = pre,
351     year = 1995,
352     volume = 51,
353     pages = {4626-4641}
354     }
355    
356     @Article{Kob95b,
357     author = {W. Kob and H.~C. Andersen},
358     title = {Testing mode-coupling theory for a supercooled
359     binary Lennard-Jones mixtures. II. Intermediate
360     scattering function and dynamic susceptibility},
361     journal = pre,
362     year = 1995,
363     volume = 52,
364     pages = {4134-4153}
365     }
366    
367     @InProceedings{Gotze89,
368     author = "W. G{\"{o}}tze",
369     title = "Aspects of Structural Glass Transitions",
370     editor = "J.~P. Hansen and D. Levesque and J. Zinn-Justin",
371     volume = "I",
372     pages = "287-503",
373     booktitle = "Liquids, Freezing and Glass Transitions",
374     year = 1989,
375     publisher = "North-Holland",
376     address = "Amsterdam"
377     }
378    
379     @Article{Sun97a,
380     author = "X. Sun and W.~H. Miller",
381     title = {Mixed semiclassical-classical approaches to the
382     dynamics of complex molecular systems},
383     journal = jcp,
384     year = 1997,
385     pages = 916
386     }
387    
388     @Article{Keshavamurthy94,
389     author = "S. Keshavamurthy and W.~H. Miller",
390     title = "ivr",
391     journal = cpl,
392     year = 1994,
393     volume = 218,
394     pages = 189
395     }
396    
397     @Article{Billing75,
398     author = "G.~D. Billing",
399     title = "ehrenfest",
400     journal = cpl,
401     year = 1975,
402     volume = 30,
403     pages = 391
404     }
405    
406     @Article{Chang90,
407     author = {Y.-T. Chang and W.~H. Miller},
408     title = {An Empirical Valence Bond Model for Constructing
409     Global Potential Energy Surfaces for Chemical
410     Reactions of Polyatomic Molecular Systems},
411     journal = jpc,
412     year = 1990,
413     volume = 94,
414     pages = {5884-5888}
415     }
416    
417     @Article{Shor94,
418     author = {P.W. Shor},
419     title = {Algorithms for quantum computation: discrete
420     logarithms and factoring},
421     journal = {Proceedings of the 35th Annual Symposium
422     on Foundations of Computer Science},
423     year = 1994,
424     pages = {124-134}
425     }
426    
427     @Article{Feynman82,
428     author = {R.~P. Feynman},
429     title = {Simulating physics with computers},
430     journal = {Int. J. Theor. Phys.},
431     year = 1982,
432     volume = 21,
433     pages = {467-488}
434     }
435    
436     @Article{Grover97,
437     author = {L.~K. Grover},
438     title = {Quantum computers can search arbitrarily large
439     databases by a single query},
440     journal = prl,
441     year = 1997,
442     volume = 79,
443     pages = {4709-4712}
444     }
445    
446     @Article{Chuang98,
447     author = {I. Chuang and N. Gershenfeld and M. Kubinec},
448     title = {Experimental Implementation of Fast Quantum Searching},
449     journal = prl,
450     year = 1998,
451     volume = 80,
452     pages = {3408-3411}
453     }
454    
455     @Article{Monroe95,
456     author = "C. Monroe and D.~M. Meekhof and B.~E. King and
457     W.~M. Itano and D.~J. Wineland",
458     title = {Demonstration of a fundamental quantum logic gate},
459     journal = prl,
460     year = 1995,
461     volume = 75,
462     pages = 4714
463     }
464    
465     @Article{Lent93,
466     author = "C.~S. Lent and P.~D. Tougaw and W.~Porod and
467     G.~H. Bernstein",
468     title = {Quantum Cellular Automata},
469     journal = {Nanotechnology},
470     year = 1993,
471     volume = 4,
472     pages = {49-57}
473     }
474    
475     @Article{Barenco95,
476     author = "A. Barenco and C.~H. Bennett and R. Cleve and
477     D.~P. DiVincenzo and N. Margolus and P. Shor and
478     T. Sleator and J.~A. Smolin and H. Weinfurter",
479     title = {elementary gates for quantum computation},
480     journal = {Phys. Rev. A},
481     year = 1995,
482     volume = 52,
483     pages = {3457-3467}
484     }
485    
486     @Article{Small97,
487     author = {T. Reinot and J.~M. Hayes and G.~J. Small},
488     title = {Electronic dephasing and electron-phonon coupling of
489     aluminum phthalocyanine tetrasulphonate in
490     hyperquenched and annealed glassy films of ethanol
491     and methanol over a broad temperature range},
492     journal = jcp,
493     year = 1997,
494     volume = 106,
495     pages = {457-466}
496     }
497    
498     @Article{Laflamme96,
499     author = {R. Laflamme and C. Miquel and J.~P. Paz and W.~H. Zurek},
500     title = {A perfect quantum error correcting code: 5 bit code
501     correcting a general 1 qubit error to encode 1 qubit
502     of information},
503     journal = prl,
504     year = 1996,
505     volume = 98,
506     pages = 77
507     }
508    
509     @Article{Shor95,
510     author = {P.~W. Shor},
511     title = {SCHEME FOR REDUCING DECOHERENCE IN QUANTUM COMPUTER MEMORY},
512     journal = {Phys. Rev. A},
513     year = 1995,
514     volume = 52,
515     pages = {2493-2496}
516     }
517    
518     @Article{Calderbank96,
519     author = {A.~R. Calderbank and P.~W. Shor},
520     title = {Good quantum error-correcting codes exist},
521     journal = {Phys. Rev. A},
522     year = 1996,
523     volume = 54,
524     pages = {1098-1105}
525     }
526    
527     @Article{Steane96,
528     author = {A.~M. Steane},
529     title = {Error correcting codes in quantum theory},
530     journal = prl,
531     year = 1996,
532     volume = 77,
533     pages = {793-797}
534     }
535    
536     @Article{Gezelter95,
537     author = {J.~D. Gezelter and W.~H. Miller},
538     title = {RESONANT FEATURES IN THE ENERGY-DEPENDENCE OF THE
539     RATE OF KETENE ISOMERIZATION},
540     journal = jcp,
541     year = 1995,
542     volume = 103,
543     pages = {7868-7876}
544     }
545    
546     @Article{Chakrabarti92,
547     author = {A.~C. Chakrabarti and D.~W. Deamer},
548     title = {PERMEABILITY OF LIPID BILAYERS TO AMINO-ACIDS AND PHOSPHATE},
549     journal = {Biochimica et Biophysica Acta},
550     year = 1992,
551     volume = 1111,
552     pages = {171-177}
553     }
554    
555     @Article{Paula96,
556     author = {S. Paula and A.~G. Volkov and A.~N. VanHoek and
557     T.~H. Haines and D.~W. Deamer},
558     title = {Permeation of protons, potassium ions, and small
559     polar molecules through phospholipid bilayers as a
560     function of membrane thickness},
561     journal = {Biophys. J.},
562     year = 1996,
563     volume = 70,
564     pages = {339-348}
565     }
566    
567     @Article{Little96,
568     author = {H.~J. Little},
569     title = {How has molecular pharmacology contributed to our
570     understanding of the mechanism(s) of general
571     anesthesia?},
572     journal = {Pharmacology \& Therapeutics},
573     year = 1996,
574     volume = 69,
575     pages = {37-58}
576     }
577    
578     @Article{McKinnon92,
579     author = {S.~J. McKinnon and S.~L. Whittenburg and B. Brooks},
580     title = {Nonequilibrium Molecular Dynamics Simulation of
581     Oxygen Diffusion through Hexadecane Monolayers with
582     Varying Concentrations of Cholesterol},
583     journal = jpc,
584     year = 1992,
585     volume = 96,
586     pages = {10497-10506}
587     }
588    
589     @Article{Venable93,
590     author = {R.~M. Venable and Y. Zhang and B.~J. Hardy and
591     R.~W. Pastor},
592     title = {Molecular Dynamics Simulations of a Lipid Bilayer
593     and of Hexadecane: An Investigation of Membrane Fluidity},
594     journal = {Science},
595     year = 1993,
596     volume = 262,
597     pages = {223-226}
598     }
599    
600     @Article{Essmann99,
601     author = {U. Essmann and M.~L. Berkowitz},
602     title = {Dynamical properties of phospholipid bilayers from
603     computer simulation},
604     journal = {Biophys. J.},
605     year = 1999,
606     volume = 76,
607     pages = {2081-2089}
608     }
609    
610     @Article{Tu98,
611     author = {K.~C. Tu and M. Tarek and M.~L. Klein and D. Scharf},
612     title = {Effects of anesthetics on the structure of a
613     phospholipid bilayer: Molecular dynamics
614     investigation of halothane in the hydrated liquid
615     crystal phase of dipalmitoylphosphatidylcholine},
616     journal = {Biophys. J.},
617     year = 1998,
618     volume = 75,
619     pages = {2123-2134}
620     }
621    
622     @Article{Pomes96,
623     author = {R. Pomes and B. Roux},
624     title = {Structure and dynamics of a proton wire: A
625     theoretical study of H+ translocation along the
626     single-file water chain in the gramicidin a channel},
627     journal = {Biophys. J.},
628     year = 1996,
629     volume = 71,
630     pages = {19-39}
631     }
632    
633     @Article{Duwez60,
634     author = {P. Duwez and R.~H. Willens and W. {Klement~Jr.}},
635     title = {Continuous Series of Metastable Solid Solutions in
636     Silver-Copper Alloys},
637     journal = {J. Appl. Phys.},
638     year = 1960,
639     volume = 31,
640     pages = {1136-1137}
641     }
642    
643     @Article{Peker93,
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645     title = {A highly processable metallic-glass -
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1389     title = {RANDOM SEQUENTIAL ADSORPTION OF ANISOTROPIC
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1556     publisher = {Pearson Educated Limited},
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1598     volume = 79,
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1648     title = {Effect of undulations on surface tension in simulated bilayers},
1649     journal = {Journal of Physical Chemistry B},
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1655     @Article{lindahl00:undulation,
1656     author = {E. Lindahl and O. Edholm},
1657     title = {Mesoscopic undulation and thickness fluctuations in lipid bilayers from molecular dynamics simulation},
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1659     year = 2000,
1660     volume = 79,
1661     pages = {426-433}
1662     }
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