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# User Rev Content
1 mmeineke 1121 @string{jcp = "J. Chem. Phys."}
2     @string{cpl = "Chem. Phys. Lett."}
3     @string{jpc = "J. Phys. Chem."}
4     @string{jpcA = "J. Phys. Chem. A"}
5     @string{jpcB = "J. Phys. Chem. B"}
6     @string{cp = "Chem. Phys."}
7     @string{acp = "Adv. Chem. Phys."}
8     @string{pra = "Phys. Rev. A"}
9     @string{prb = "Phys. Rev. B"}
10     @string{pre = "Phys. Rev. E"}
11     @string{prl = "Phys. Rev. Lett."}
12     @string{rmp = "Rev. Mod. Phys."}
13     @string{jml = "J. Mol. Liq."}
14     @string{mp = "Mol. Phys."}
15     @string{pnas = "Proc. Natl. Acad. Sci. USA"}
16     @string{jacs = "J. Am. Chem. Soc."}
17 gezelter 1439 @string{jcc = "J. Comp. Chem."}
18     @string{cpc = "Comp. Phys. Comm."}
19     @string{bj = "Biophys. J."}
20 mmeineke 1121
21     @Book{Berne90,
22     author = {B.~J. Berne and R. Pecora},
23     title = {Dynamic Light Scattering},
24     publisher = {Robert E. Krieger Publishing Company, Inc.},
25     year = 1990,
26     address = {Malabar, Florida}
27     }
28    
29     @Article{Evans77,
30     author = {D.~J. Evans},
31     title = {On the representation of orientation space},
32     journal = {Mol. Phys.},
33     year = 1977,
34     volume = 34,
35     pages = {317-325}
36     }
37    
38     @Article{Tuckerman92,
39     author = {M. Tuckerman and B.~J. Berne and G.~J. Martyna},
40     title = {Reversible multiple time scale molecular dynamics},
41     journal = jcp,
42     year = 1992,
43     volume = 97,
44     pages = {1990-2001}
45     }
46    
47     @Book{Hansen86,
48     author = {J.~P. Hansen and I.~R. McDonald},
49     title = {Theory of Simple Liquids},
50     chapter = 7,
51     publisher = {Academic Press},
52     year = 1986,
53     address = {London},
54     pages = {199-206}
55     }
56    
57     @Article{Angelani98,
58     author = {L. Angelani and G. Parisi and G. Ruocco and G. Viliani},
59     title = {Connected Network of Minima as a Model Glass: Long
60     Time Dynamics},
61     journal = prl,
62     year = 1998,
63     volume = 81,
64     number = 21,
65     pages = {4648-4651}
66     }
67    
68     @Article{Stillinger82,
69     author = {F.~H. Stillinger and T.~A. Weber},
70     title = {Hidden structure in liquids},
71     journal = pra,
72     year = 1982,
73     volume = 25,
74     number = 2,
75     pages = {978-989}
76     }
77    
78     @Article{Stillinger83,
79     author = {F.~H. Stillinger and T.~A. Weber},
80     title = {Dynamics of structural transitions in liquids},
81     journal = pra,
82     year = 1983,
83     volume = 28,
84     number = 4,
85     pages = {2408-2416}
86     }
87    
88     @Article{Weber84,
89     author = {T.~A. Weber and F.~H. Stillinger},
90     title = {The effect of density on the inherent structure in
91     liquids},
92     journal = jcp,
93     year = 1984,
94     volume = 80,
95     number = 6,
96     pages = {2742-2746}
97     }
98    
99     @Article{Stillinger85,
100     author = {F.~H. Stillinger and T.~A. Weber},
101     title = {Inherent structure theory of liquids in the
102     hard-sphere limit},
103     journal = jcp,
104     year = 1985,
105     volume = 83,
106     number = 9,
107     pages = {4767-4775}
108     }
109    
110     @Article{Stillinger98,
111     author = {S. Sastry and P.~G. Debenedetti and F.~H. Stillinger},
112     title = {Signatures of distinct dynamical regimes in the
113     energy landscape of a glass-forming liquid},
114     journal = {Nature},
115     year = 1998,
116     volume = 393,
117     pages = {554-557}
118     }
119    
120    
121     @Article{Parkhurst75a,
122     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
123     title = {Dense liquids. I. The effect of density and
124     temperature on viscosity of tetramethylsilane and
125     benzene-$\mbox{D}_6$},
126     journal = jcp,
127     year = 1975,
128     volume = 63,
129     number = 6,
130     pages = {2698-2704}
131     }
132    
133     @Article{Parkhurst75b,
134     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
135     title = {Dense liquids. II. The effect of density and
136     temperature on viscosity of tetramethylsilane and
137     benzene },
138     journal = jcp,
139     year = 1975,
140     volume = 63,
141     number = 6,
142     pages = {2705-2709}
143     }
144    
145     @Article{Forester97,
146     author = {T.~R. Forester and W. Smith and J.~H.~R. Clarke},
147     title = {Antibiotic activity of valinomycin - Molecular
148     dynamics simulations involving the water/membrane
149     interface},
150     journal = {J. Chem. Soc. - Faraday Transactions},
151     year = 1997,
152     volume = 93,
153     pages = {613-619}
154     }
155    
156     @Article{Tieleman98,
157     author = {D.~P. Tieleman and H.~J.~C. Berendsen},
158     title = {A molecular dynamics study of the pores formed by
159     Escherichia coli OmpF porin in a fully hydrated
160     palmitoyloleoylphosphatidylcholine bilayer},
161 gezelter 1439 journal = bj,
162 mmeineke 1121 year = 1998,
163     volume = 74,
164     pages = {2786-2801}
165     }
166    
167     @Article{Cascales98,
168     author = {J.~J.~L. Cascales and J.~G.~H. Cifre and J.~G. de~la~Torre},
169     title = {Anaesthetic mechanism on a model biological
170     membrane: A molecular dynamics simulation study},
171     journal = {J. Phys. Chem. B},
172     year = 1998,
173     volume = 102,
174     pages = {625-631}
175     }
176    
177     @Article{Bassolino95,
178     author = {D. Bassolino and H.~E. Alper and T.~R. Stouch},
179     title = {MECHANISM OF SOLUTE DIFFUSION THROUGH LIPID
180     BILAYER-MEMBRANES BY MOLECULAR-DYNAMICS SIMULATION},
181     journal = {J. Am. Chem. Soc.},
182     year = 1995,
183     volume = 117,
184     pages = {4118-4129}
185     }
186    
187     @Article{Alper95,
188     author = {H.~E. Alper and T.~R. Stouch},
189     title = {ORIENTATION AND DIFFUSION OF A DRUG ANALOG IN
190     BIOMEMBRANES - MOLECULAR-DYNAMICS SIMULATIONS},
191     journal = {J. Phys. Chem.},
192     year = 1995,
193     volume = 99,
194     pages = {5724-5731}
195     }
196    
197     @Article{Sok92,
198 gezelter 1439 author = {R.~M. Sok and H.~J.~C. Berendsen and W.~F. {van~Gunsteren}},
199 mmeineke 1121 title = {MOLECULAR-DYNAMICS SIMULATION OF THE TRANSPORT OF
200     SMALL MOLECULES ACROSS A POLYMER MEMBRANE},
201     journal = {J. Chem. Phys.},
202     year = 1992,
203     volume = 96,
204     pages = {4699-4704}
205     }
206    
207     @Article{Rabani99,
208     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
209     title = {Direct Observation of Stretched-Exponential
210     Relaxation in Low-Temperature Lennard-Jones Systems
211     Using the Cage Correlation Function},
212     journal = prl,
213     year = {1999},
214     volume = 82,
215     pages = {3649}
216     }
217    
218     @Article{Rabani97,
219     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
220     title = {Calculating the hopping rate for self-diffusion on
221     rough potential energy surfaces: Cage correlations},
222     journal = {J. Chem. Phys.},
223     year = 1997,
224     volume = 107,
225     pages = {6867-6876}
226     }
227    
228     @Article{Gezelter99,
229     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
230     title = {Methods for calculating the hopping rate for
231     orientational and spatial diffusion in a molecular
232     liquid: $\mbox{CS}_{2}$},
233     journal = jcp,
234     year = 1999,
235     volume = 110,
236     pages = 3444
237     }
238    
239     @Article{Gezelter98a,
240     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
241     title = {Response to 'Comment on a Critique of the
242     Instantaneous Normal Mode (INM) Approach to
243     Diffusion'},
244     journal = jcp,
245     year = 1998,
246     volume = 109,
247     pages = 4695
248     }
249    
250     @Article{Gezelter97,
251     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
252     title = {Can imaginary instantaneous normal mode frequencies
253     predict barriers to self-diffusion?},
254     journal = jcp,
255     year = 1997,
256     volume = 107,
257     pages = 4618
258     }
259    
260     @Article{Zwanzig83,
261     author = {R. Zwanzig},
262     title = {On the relation between self-diffusion and viscosity
263     of liquids},
264     journal = jcp,
265     year = 1983,
266     volume = 79,
267     pages = {4507-4508}
268     }
269    
270     @Article{Zwanzig88,
271     author = {R. Zwanzig},
272     title = {Diffusion in rough potential},
273     journal = {Proc. Natl. Acad. Sci. USA},
274     year = 1988,
275     volume = 85,
276     pages = 2029
277     }
278    
279     @Article{Stillinger95,
280     author = {F.~H. Stillinger},
281     title = {A Topographic View of Supercooled Liquids and Glass
282     Formation},
283     journal = {Science},
284     year = 1995,
285     volume = 267,
286     pages = {1935-1939}
287     }
288    
289     @InCollection{Angell85,
290     author = {C.~A. Angell},
291     title = {unknown},
292     booktitle = {Relaxations in Complex Systems},
293     publisher = {National Technical Information Service,
294     U.S. Department of Commerce},
295     year = 1985,
296     editor = {K.~Ngai and G.~B. Wright},
297     address = {Springfield, VA},
298     pages = 1
299     }
300    
301     @Article{Bembenek96,
302     author = {S.~D. Bembenek and B.~B. Laird},
303     title = {The role of localization in glasses and supercooled liquids},
304     journal = jcp,
305     year = 1996,
306     volume = 104,
307     pages = 5199
308     }
309    
310     @Article{Sun97,
311     author = {X. Sun and W.~H. Miller},
312     title = {Semiclassical initial value representation for
313     electronically nonadiabatic molecular dynamics},
314     journal = jcp,
315     year = 1997,
316     volume = 106,
317     pages = 6346
318     }
319    
320     @Article{Spath96,
321     author = {B.~W. Spath and W.~H. Miller},
322     title = {SEMICLASSICAL CALCULATION OF CUMULATIVE REACTION
323     PROBABILITIES},
324     journal = jcp,
325     year = 1996,
326     volume = 104,
327     pages = 95
328     }
329    
330     @Book{Warshel91,
331     author = {Arieh Warshel},
332     title = {Computer modeling of chemical reactions in enzymes
333     and solutions},
334     publisher = {Wiley},
335     year = 1991,
336     address = {New York}
337     }
338    
339     @Article{Vuilleumier97,
340     author = {Rodolphe Vuilleumier and Daniel Borgis},
341     title = {Molecular Dynamics of an excess proton in water
342     using a non-additive valence bond force field},
343     journal = jpc,
344     year = 1997,
345     volume = {in press}
346     }
347    
348     @Article{Kob95a,
349     author = {W. Kob and H.~C. Andersen},
350     title = {Testing mode-coupling theory for a supercooled
351     binary Lennard-Jones mixtures: The van Hove
352     corraltion function},
353     journal = pre,
354     year = 1995,
355     volume = 51,
356     pages = {4626-4641}
357     }
358    
359     @Article{Kob95b,
360     author = {W. Kob and H.~C. Andersen},
361     title = {Testing mode-coupling theory for a supercooled
362     binary Lennard-Jones mixtures. II. Intermediate
363     scattering function and dynamic susceptibility},
364     journal = pre,
365     year = 1995,
366     volume = 52,
367     pages = {4134-4153}
368     }
369    
370     @InProceedings{Gotze89,
371     author = "W. G{\"{o}}tze",
372     title = "Aspects of Structural Glass Transitions",
373     editor = "J.~P. Hansen and D. Levesque and J. Zinn-Justin",
374     volume = "I",
375     pages = "287-503",
376     booktitle = "Liquids, Freezing and Glass Transitions",
377     year = 1989,
378     publisher = "North-Holland",
379     address = "Amsterdam"
380     }
381    
382     @Article{Sun97a,
383     author = "X. Sun and W.~H. Miller",
384     title = {Mixed semiclassical-classical approaches to the
385     dynamics of complex molecular systems},
386     journal = jcp,
387     year = 1997,
388     pages = 916
389     }
390    
391     @Article{Keshavamurthy94,
392     author = "S. Keshavamurthy and W.~H. Miller",
393     title = "ivr",
394     journal = cpl,
395     year = 1994,
396     volume = 218,
397     pages = 189
398     }
399    
400     @Article{Billing75,
401     author = "G.~D. Billing",
402     title = "ehrenfest",
403     journal = cpl,
404     year = 1975,
405     volume = 30,
406     pages = 391
407     }
408    
409     @Article{Chang90,
410     author = {Y.-T. Chang and W.~H. Miller},
411     title = {An Empirical Valence Bond Model for Constructing
412     Global Potential Energy Surfaces for Chemical
413     Reactions of Polyatomic Molecular Systems},
414     journal = jpc,
415     year = 1990,
416     volume = 94,
417     pages = {5884-5888}
418     }
419    
420     @Article{Shor94,
421     author = {P.W. Shor},
422     title = {Algorithms for quantum computation: discrete
423     logarithms and factoring},
424     journal = {Proceedings of the 35th Annual Symposium
425     on Foundations of Computer Science},
426     year = 1994,
427     pages = {124-134}
428     }
429    
430     @Article{Feynman82,
431     author = {R.~P. Feynman},
432     title = {Simulating physics with computers},
433     journal = {Int. J. Theor. Phys.},
434     year = 1982,
435     volume = 21,
436     pages = {467-488}
437     }
438    
439     @Article{Grover97,
440     author = {L.~K. Grover},
441     title = {Quantum computers can search arbitrarily large
442     databases by a single query},
443     journal = prl,
444     year = 1997,
445     volume = 79,
446     pages = {4709-4712}
447     }
448    
449     @Article{Chuang98,
450     author = {I. Chuang and N. Gershenfeld and M. Kubinec},
451     title = {Experimental Implementation of Fast Quantum Searching},
452     journal = prl,
453     year = 1998,
454     volume = 80,
455     pages = {3408-3411}
456     }
457    
458     @Article{Monroe95,
459     author = "C. Monroe and D.~M. Meekhof and B.~E. King and
460     W.~M. Itano and D.~J. Wineland",
461     title = {Demonstration of a fundamental quantum logic gate},
462     journal = prl,
463     year = 1995,
464     volume = 75,
465     pages = 4714
466     }
467    
468     @Article{Lent93,
469     author = "C.~S. Lent and P.~D. Tougaw and W.~Porod and
470     G.~H. Bernstein",
471     title = {Quantum Cellular Automata},
472     journal = {Nanotechnology},
473     year = 1993,
474     volume = 4,
475     pages = {49-57}
476     }
477    
478     @Article{Barenco95,
479     author = "A. Barenco and C.~H. Bennett and R. Cleve and
480     D.~P. DiVincenzo and N. Margolus and P. Shor and
481     T. Sleator and J.~A. Smolin and H. Weinfurter",
482     title = {elementary gates for quantum computation},
483     journal = {Phys. Rev. A},
484     year = 1995,
485     volume = 52,
486     pages = {3457-3467}
487     }
488    
489     @Article{Small97,
490     author = {T. Reinot and J.~M. Hayes and G.~J. Small},
491     title = {Electronic dephasing and electron-phonon coupling of
492     aluminum phthalocyanine tetrasulphonate in
493     hyperquenched and annealed glassy films of ethanol
494     and methanol over a broad temperature range},
495     journal = jcp,
496     year = 1997,
497     volume = 106,
498     pages = {457-466}
499     }
500    
501     @Article{Laflamme96,
502     author = {R. Laflamme and C. Miquel and J.~P. Paz and W.~H. Zurek},
503     title = {A perfect quantum error correcting code: 5 bit code
504     correcting a general 1 qubit error to encode 1 qubit
505     of information},
506     journal = prl,
507     year = 1996,
508     volume = 98,
509     pages = 77
510     }
511    
512     @Article{Shor95,
513     author = {P.~W. Shor},
514     title = {SCHEME FOR REDUCING DECOHERENCE IN QUANTUM COMPUTER MEMORY},
515     journal = {Phys. Rev. A},
516     year = 1995,
517     volume = 52,
518     pages = {2493-2496}
519     }
520    
521     @Article{Calderbank96,
522     author = {A.~R. Calderbank and P.~W. Shor},
523     title = {Good quantum error-correcting codes exist},
524     journal = {Phys. Rev. A},
525     year = 1996,
526     volume = 54,
527     pages = {1098-1105}
528     }
529    
530     @Article{Steane96,
531     author = {A.~M. Steane},
532     title = {Error correcting codes in quantum theory},
533     journal = prl,
534     year = 1996,
535     volume = 77,
536     pages = {793-797}
537     }
538    
539     @Article{Gezelter95,
540     author = {J.~D. Gezelter and W.~H. Miller},
541     title = {RESONANT FEATURES IN THE ENERGY-DEPENDENCE OF THE
542     RATE OF KETENE ISOMERIZATION},
543     journal = jcp,
544     year = 1995,
545     volume = 103,
546     pages = {7868-7876}
547     }
548    
549     @Article{Chakrabarti92,
550     author = {A.~C. Chakrabarti and D.~W. Deamer},
551     title = {PERMEABILITY OF LIPID BILAYERS TO AMINO-ACIDS AND PHOSPHATE},
552     journal = {Biochimica et Biophysica Acta},
553     year = 1992,
554     volume = 1111,
555     pages = {171-177}
556     }
557    
558     @Article{Paula96,
559     author = {S. Paula and A.~G. Volkov and A.~N. VanHoek and
560     T.~H. Haines and D.~W. Deamer},
561     title = {Permeation of protons, potassium ions, and small
562     polar molecules through phospholipid bilayers as a
563     function of membrane thickness},
564 gezelter 1439 journal = bj,
565 mmeineke 1121 year = 1996,
566     volume = 70,
567     pages = {339-348}
568     }
569    
570     @Article{Little96,
571     author = {H.~J. Little},
572     title = {How has molecular pharmacology contributed to our
573     understanding of the mechanism(s) of general
574     anesthesia?},
575     journal = {Pharmacology \& Therapeutics},
576     year = 1996,
577     volume = 69,
578     pages = {37-58}
579     }
580    
581     @Article{McKinnon92,
582     author = {S.~J. McKinnon and S.~L. Whittenburg and B. Brooks},
583     title = {Nonequilibrium Molecular Dynamics Simulation of
584     Oxygen Diffusion through Hexadecane Monolayers with
585     Varying Concentrations of Cholesterol},
586     journal = jpc,
587     year = 1992,
588     volume = 96,
589     pages = {10497-10506}
590     }
591    
592     @Article{Venable93,
593     author = {R.~M. Venable and Y. Zhang and B.~J. Hardy and
594     R.~W. Pastor},
595     title = {Molecular Dynamics Simulations of a Lipid Bilayer
596     and of Hexadecane: An Investigation of Membrane Fluidity},
597     journal = {Science},
598     year = 1993,
599     volume = 262,
600     pages = {223-226}
601     }
602    
603     @Article{Essmann99,
604     author = {U. Essmann and M.~L. Berkowitz},
605     title = {Dynamical properties of phospholipid bilayers from
606     computer simulation},
607 gezelter 1439 journal = bj,
608 mmeineke 1121 year = 1999,
609     volume = 76,
610     pages = {2081-2089}
611     }
612    
613     @Article{Tu98,
614     author = {K.~C. Tu and M. Tarek and M.~L. Klein and D. Scharf},
615     title = {Effects of anesthetics on the structure of a
616     phospholipid bilayer: Molecular dynamics
617     investigation of halothane in the hydrated liquid
618     crystal phase of dipalmitoylphosphatidylcholine},
619 gezelter 1439 journal = bj,
620 mmeineke 1121 year = 1998,
621     volume = 75,
622     pages = {2123-2134}
623     }
624    
625     @Article{Pomes96,
626     author = {R. Pomes and B. Roux},
627     title = {Structure and dynamics of a proton wire: A
628     theoretical study of H+ translocation along the
629     single-file water chain in the gramicidin a channel},
630 gezelter 1439 journal = bj,
631 mmeineke 1121 year = 1996,
632     volume = 71,
633     pages = {19-39}
634     }
635    
636     @Article{Duwez60,
637     author = {P. Duwez and R.~H. Willens and W. {Klement~Jr.}},
638     title = {Continuous Series of Metastable Solid Solutions in
639     Silver-Copper Alloys},
640     journal = {J. Appl. Phys.},
641     year = 1960,
642     volume = 31,
643     pages = {1136-1137}
644     }
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