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1 \documentclass[aps,pre,endfloats*,preprint,amssymb,showpacs]{revtex4}
2 \usepackage{epsfig}
3
4 \begin{document}
5 \renewcommand{\thefootnote}{\fnsymbol{footnote}}
6 \renewcommand{\theequation}{\arabic{section}.\arabic{equation}}
7
8 %\bibliographystyle{aps}
9
10 \title{Spontaneous Corrugation of Dipolar Membranes}
11 \author{Xiuquan Sun and J. Daniel Gezelter}
12 \email[]{E-mail: gezelter@nd.edu}
13 \affiliation{Department of Chemistry and Biochemistry,\\
14 University of Notre Dame, \\
15 Notre Dame, Indiana 46556}
16
17 \date{\today}
18
19 \begin{abstract}
20 We present a simple model for dipolar membranes that gives
21 lattice-bound point dipoles complete orientational freedom as well as
22 translational freedom along one coordinate (out of the plane of the
23 membrane). There is an additional harmonic surface tension which
24 binds each of the dipoles to the six nearest neighbors on either
25 triangular or distorted lattices. The translational freedom
26 of the dipoles allows triangular lattices to find states that break out
27 of the normal orientational disorder of frustrated configurations and
28 which are stabilized by long-range antiferroelectric ordering. In
29 order to break out of the frustrated states, the dipolar membranes
30 form corrugated or ``rippled'' phases that make the lattices
31 effectively non-triangular. We observe three common features of the
32 corrugated dipolar membranes: 1) the corrugated phases develop easily
33 when hosted on triangular lattices, 2) the wave vectors for the surface
34 ripples are always found to be perpendicular to the dipole director
35 axis, and 3) on triangular lattices, the dipole director axis is found
36 to be parallel to any of the three equivalent lattice directions.
37 \end{abstract}
38
39 \pacs{68.03.Hj, 82.20.Wt}
40 \maketitle
41
42
43 \section{Introduction}
44 \label{Int}
45 There has been intense recent interest in the phase behavior of
46 dipolar
47 fluids.\cite{Tlusty00,Teixeira00,Tavares02,Duncan04,Holm05,Duncan06}
48 Due to the anisotropic interactions between dipoles, dipolar fluids
49 can present anomalous phase behavior. Examples of condensed-phase
50 dipolar systems include ferrofluids, electro-rheological fluids, and
51 even biological membranes. Computer simulations have provided useful
52 information on the structural features and phase transition of the
53 dipolar fluids. Simulation results indicate that at low densities,
54 these fluids spontaneously organize into head-to-tail dipolar
55 ``chains''.\cite{Teixeira00,Holm05} At low temperatures, these chains
56 and rings prevent the occurrence of a liquid-gas phase transition.
57 However, Tlusty and Safran showed that there is a defect-induced phase
58 separation into a low-density ``chain'' phase and a higher density
59 Y-defect phase.\cite{Tlusty00} Recently, inspired by experimental
60 studies on monolayers of dipolar fluids, theoretical models using
61 two-dimensional dipolar soft spheres have appeared in the literature.
62 Tavares {\it et al.} tested their theory for chain and ring length
63 distributions in two dimensions and carried out Monte Carlo
64 simulations in the low-density phase.\cite{Tavares02} Duncan and Camp
65 performed dynamical simulations on two-dimensional dipolar fluids to
66 study transport and orientational dynamics in these
67 systems.\cite{Duncan04} They have recently revisited two-dimensional
68 systems to study the kinetic conditions for the defect-induced
69 condensation into the Y-defect phase.\cite{Duncan06}
70
71 Although they are not traditionally classified as 2-dimensional
72 dipolar fluids, hydrated lipids aggregate spontaneously to form
73 bilayers which exhibit a variety of phases depending on their
74 temperatures and compositions. At high temperatures, the fluid
75 ($L_{\alpha}$) phase of Phosphatidylcholine (PC) lipids closely
76 resembles a dipolar fluid. However, at lower temperatures, packing of
77 the molecules becomes important, and the translational freedom of
78 lipid molecules is thought to be substantially restricted. A
79 corrugated or ``rippled'' phase ($P_{\beta'}$) appears as an
80 intermediate phase between the gel ($L_\beta$) and fluid
81 ($L_{\alpha}$) phases for relatively pure phosphatidylcholine (PC)
82 bilayers. The $P_{\beta'}$ phase has attracted substantial
83 experimental interest over the past 30 years. Most structural
84 information of the ripple phase has been obtained by the X-ray
85 diffraction~\cite{Sun96,Katsaras00} and freeze-fracture electron
86 microscopy (FFEM).~\cite{Copeland80,Meyer96} Recently, Kaasgaard {\it
87 et al.} used atomic force microscopy (AFM) to observe ripple phase
88 morphology in bilayers supported on mica.~\cite{Kaasgaard03} The
89 experimental results provide strong support for a 2-dimensional
90 triangular packing lattice of the lipid molecules within the ripple
91 phase. This is a notable change from the observed lipid packing
92 within the gel phase.~\cite{Cevc87}
93
94 Although the results of dipolar fluid simulations can not be directly
95 mapped onto the phases of lipid bilayers, the rich behaviors exhibited
96 by simple dipolar models can give us some insight into the corrugation
97 phenomenon of the $P_{\beta'}$ phase. There have been a number of
98 theoretical approaches (and some heroic simulations) undertaken to try
99 to explain this phase, but to date, none have looked specifically at
100 the contribution of the dipolar character of the lipid head groups
101 towards this corrugation. Before we present our simple model, we will
102 briefly survey the previous theoretical work on this topic.
103
104 The theoretical models that have been put forward to explain the
105 formation of the $P_{\beta'}$ phase have presented a number of
106 conflicting but intriguing explanations. Marder {\it et al.} used a
107 curvature-dependent Landau-de Gennes free-energy functional to predict
108 a rippled phase.~\cite{Marder84} This model and other related
109 continuum models predict higher fluidity in convex regions and that
110 concave portions of the membrane correspond to more solid-like
111 regions. Carlson and Sethna used a packing-competition model (in
112 which head groups and chains have competing packing energetics) to
113 predict the formation of a ripple-like phase. Their model predicted
114 that the high-curvature portions have lower-chain packing and
115 correspond to more fluid-like regions. Goldstein and Leibler used a
116 mean-field approach with a planar model for {\em inter-lamellar}
117 interactions to predict rippling in multilamellar
118 phases.~\cite{Goldstein88} McCullough and Scott proposed that the {\em
119 anisotropy of the nearest-neighbor interactions} coupled to
120 hydrophobic constraining forces which restrict height differences
121 between nearest neighbors is the origin of the ripple
122 phase.~\cite{McCullough90} Lubensky and MacKintosh introduced a Landau
123 theory for tilt order and curvature of a single membrane and concluded
124 that {\em coupling of molecular tilt to membrane curvature} is
125 responsible for the production of ripples.~\cite{Lubensky93} Misbah,
126 Duplat and Houchmandzadeh proposed that {\em inter-layer dipolar
127 interactions} can lead to ripple instabilities.~\cite{Misbah98}
128 Heimburg presented a {\em coexistence model} for ripple formation in
129 which he postulates that fluid-phase line defects cause sharp
130 curvature between relatively flat gel-phase regions.~\cite{Heimburg00}
131 Kubica has suggested that a lattice model of polar head groups could
132 be valuable in trying to understand bilayer phase
133 formation.~\cite{Kubica02} Bannerjee used Monte Carlo simulations of
134 lamellar stacks of triangular lattices to show that large headgroups
135 and molecular tilt with respect to the membrane normal vector can
136 cause bulk rippling.~\cite{Bannerjee02}
137
138 Large-scale molecular dynamics simulations have also been performed on
139 rippled phases using united atom as well as molecular scale
140 models. De~Vries {\it et al.} studied the structure of lecithin ripple
141 phases via molecular dynamics and their simulations seem to support
142 the coexistence models (i.e. fluid-like chain dynamics was observed in
143 the kink regions).~\cite{deVries05} A similar coarse-grained approach
144 has been used to study the line tension of bilayer
145 edges.\cite{Jiang04,deJoannis06} Ayton and Voth have found significant
146 undulations in zero-surface-tension states of membranes simulated via
147 dissipative particle dynamics, but their results are consistent with
148 purely thermal undulations.~\cite{Ayton02} Brannigan, Tamboli and
149 Brown have used a molecular scale model to elucidate the role of
150 molecular shape on membrane phase behavior and
151 elasticity.~\cite{Brannigan04b} They have also observed a buckled
152 hexatic phase with strong tail and moderate alignment
153 attractions.~\cite{Brannigan04a}
154
155 The problem with using atomistic and even coarse-grained approaches to
156 study this phenomenon is that only a relatively small number of
157 periods of the corrugation (i.e. one or two) can be realistically
158 simulated given current technology. Also, simulations of lipid
159 bilayers are traditionally carried out with periodic boundary
160 conditions in two or three dimensions and these have the potential to
161 enhance the periodicity of the system at that wavelength. To avoid
162 this pitfall, we are using a model which allows us to have
163 sufficiently large systems so that we are not causing artificial
164 corrugation through the use of periodic boundary conditions.
165
166 At the other extreme in density from the traditional simulations of
167 dipolar fluids is the behavior of dipoles locked on regular lattices.
168 Ferroelectric states (with long-range dipolar order) can be observed
169 in dipolar systems with non-triangular packings. However, {\em
170 triangularly}-packed 2-D dipolar systems are inherently frustrated and
171 one would expect a dipolar-disordered phase to be the lowest free
172 energy configuration. Therefore, it would seem unlikely that a
173 frustrated lattice in a dipolar-disordered state could exhibit the
174 long-range periodicity in the range of 100-600 \AA (as exhibited in
175 the ripple phases studied by Kaasgard {\it et
176 al.}).~\cite{Kaasgaard03}
177
178 Is there an intermediate model between the low-density dipolar fluids
179 and the rigid lattice models which has the potential to exhibit the
180 corrugation phenomenon of the $P_{\beta'}$ phase? What we present
181 here is an attempt to find a simple dipolar model which will exhibit
182 this behavior. We are using a modified XYZ lattice model; details of
183 the model can be found in section
184 \ref{sec:model}, results of Monte Carlo simulations using this model
185 are presented in section
186 \ref{sec:results}, and section \ref{sec:discussion} contains our conclusions.
187
188 \section{2-D Dipolar Membrane}
189 \label{sec:model}
190
191 The point of developing this model was to arrive at the simplest
192 possible theoretical model which could exhibit spontaneous corrugation
193 of a two-dimensional dipolar medium. Since molecules in the ripple
194 phase have limited translational freedom, we have chosen a lattice to
195 support the dipoles in the x-y plane. The lattice may be either
196 triangular (lattice constants $a/b = \sqrt{3}$) or distorted.
197 However, each dipole has 3 degrees of freedom. They may move freely
198 {\em out} of the x-y plane (along the $z$ axis), and they have
199 complete orientational freedom ($0 <= \theta <= \pi$, $0 <= \phi < 2
200 \pi$). This is essentially a modified X-Y-Z model with translational
201 freedom along the z-axis.
202
203 The potential energy of the system,
204 \begin{equation}
205 V = \sum_i \left( \sum_{j \in NN_i}^6
206 \frac{k_r}{2}\left( r_{ij}-\sigma \right)^2 + \sum_{j>i} \frac{|\mu|^2}{4\pi \epsilon_0 r_{ij}^3} \left[
207 {\mathbf{\hat u}_i} \cdot {\mathbf{\hat u}_j} -
208 3({\mathbf{\hat u}_i} \cdot {\mathbf{\hat
209 r}_{ij}})({\mathbf{\hat u}_j} \cdot {\mathbf{\hat r}_{ij}})\right]
210 \right)
211 \label{eq:pot}
212 \end{equation}
213
214 In this potential, $\mathbf{\hat u}_i$ is the unit vector pointing
215 along dipole $i$ and $\mathbf{\hat r}_{ij}$ is the unit vector
216 pointing along the inter-dipole vector $\mathbf{r}_{ij}$. The entire
217 potential is governed by three parameters, the dipolar strength
218 ($\mu$), the harmonic spring constant ($k_r$) and the preferred
219 intermolecular spacing ($\sigma$). In practice, we set the value of
220 $\sigma$ to the average inter-molecular spacing from the planar
221 lattice, yielding a potential model that has only two parameters for a
222 particular choice of lattice constants $a$ (along the $x$-axis) and
223 $b$ (along the $y$-axis). We also define a set of reduced parameters
224 based on the length scale ($\sigma$) and the energy of the harmonic
225 potential at a deformation of 2 $\sigma$ ($\epsilon = k_r \sigma^2 /
226 2$). Using these two constants, we perform our calculations using
227 reduced distances, ($r^{*} = r / \sigma$), temperatures ($T^{*} = 2
228 k_B T / k_r \sigma^2$), densities ($\rho^{*} = N \sigma^2 / L_x L_y$),
229 and dipole moments ($\mu^{*} = \mu / \sqrt{4 \pi \epsilon_0 \sigma^5
230 k_r / 2}$).
231
232 To investigate the phase behavior of this model, we have performed a
233 series of Metropolis Monte Carlo simulations of moderately-sized (34.3
234 $\sigma$ on a side) patches of membrane hosted on both triangular
235 ($\gamma = a/b = \sqrt{3}$) and distorted ($\gamma \neq \sqrt{3}$)
236 lattices. The linear extent of one edge of the monolayer was $20 a$
237 and the system was kept roughly square. The average distance that
238 coplanar dipoles were positioned from their six nearest neighbors was
239 1 $\sigma$ (on both triangular and distorted lattices). Typical
240 system sizes were 1360 dipoles for the triangular lattices and
241 840-2800 dipoles for the distorted lattices. Two-dimensional periodic
242 boundary conditions were used, and the cutoff for the dipole-dipole
243 interaction was set to 4.3 $\sigma$. Since dipole-dipole interactions
244 decay rapidly with distance, and since the intrinsic three-dimensional
245 periodicity of the Ewald sum can give artifacts in 2-d systems, we
246 have chosen not to use it in these calculations. Although the Ewald
247 sum has been reformulated to handle 2-D
248 systems,\cite{Parry75,Parry76,Heyes77,deLeeuw79,Rhee89} these methods
249 are computationally expensive,\cite{Spohr97,Yeh99} and are not
250 necessary in this case. All parameters ($T^{*}$, $\mu^{*}$, and
251 $\gamma$) were varied systematically to study the effects of these
252 parameters on the formation of ripple-like phases.
253
254 \section{Results and Analysis}
255 \label{sec:results}
256
257 \subsection{Dipolar Ordering and Coexistence Temperatures}
258 The principal method for observing the orientational ordering
259 transition in dipolar systems is the $P_2$ order parameter (defined as
260 $1.5 \times \lambda_{max}$, where $\lambda_{max}$ is the largest
261 eigenvalue of the matrix,
262 \begin{equation}
263 {\mathsf{S}} = \frac{1}{N} \sum_i \left(
264 \begin{array}{ccc}
265 u^{x}_i u^{x}_i-\frac{1}{3} & u^{x}_i u^{y}_i & u^{x}_i u^{z}_i \\
266 u^{y}_i u^{x}_i & u^{y}_i u^{y}_i -\frac{1}{3} & u^{y}_i u^{z}_i \\
267 u^{z}_i u^{x}_i & u^{z}_i u^{y}_i & u^{z}_i u^{z}_i -\frac{1}{3}
268 \end{array} \right).
269 \label{eq:opmatrix}
270 \end{equation}
271 Here $u^{\alpha}_i$ is the $\alpha=x,y,z$ component of the unit vector
272 for dipole $i$. $P_2$ will be $1.0$ for a perfectly-ordered system
273 and near $0$ for a randomized system. Note that this order parameter
274 is {\em not} equal to the polarization of the system. For example,
275 the polarization of the perfect antiferroelectric system is $0$, but
276 $P_2$ for an antiferroelectric system is $1$. The eigenvector of
277 $\mathsf{S}$ corresponding to the largest eigenvalue is familiar as
278 the director axis, which can be used to determine a privileged dipolar
279 axis for dipole-ordered systems. The top panel in Fig. \ref{phase}
280 shows the values of $P_2$ as a function of temperature for both
281 triangular ($\gamma = 1.732$) and distorted ($\gamma=1.875$)
282 lattices.
283
284 \begin{figure}[ht]
285 \centering
286 \caption{Top panel: The $P_2$ dipolar order parameter as a function of
287 temperature for both triangular ($\gamma = 1.732$) and distorted
288 ($\gamma = 1.875$) lattices. Bottom Panel: The phase diagram for the
289 dipolar membrane model. The line denotes the division between the
290 dipolar ordered (antiferroelectric) and disordered phases. An
291 enlarged view near the triangular lattice is shown inset.}
292 \includegraphics[width=\linewidth]{phase.pdf}
293 \label{phase}
294 \end{figure}
295
296 There is a clear order-disorder transition in evidence from this data.
297 Both the triangular and distorted lattices have dipolar-ordered
298 low-temperature phases, and orientationally-disordered high
299 temperature phases. The coexistence temperature for the triangular
300 lattice is significantly lower than for the distorted lattices, and
301 the bulk polarization is approximately $0$ for both dipolar ordered
302 and disordered phases. This gives strong evidence that the dipolar
303 ordered phase is antiferroelectric. We have verified that this
304 dipolar ordering transition is not a function of system size by
305 performing identical calculations with systems twice as large. The
306 transition is equally smooth at all system sizes that were studied.
307 Additionally, we have repeated the Monte Carlo simulations over a wide
308 range of lattice ratios ($\gamma$) to generate a dipolar
309 order/disorder phase diagram. The bottom panel in Fig. \ref{phase}
310 shows that the triangular lattice is a low-temperature cusp in the
311 $T^{*}-\gamma$ phase diagram.
312
313 This phase diagram is remarkable in that it shows an antiferroelectric
314 phase near $\gamma=1.732$ where one would expect lattice frustration
315 to result in disordered phases at all temperatures. Observations of
316 the configurations in this phase show clearly that the system has
317 accomplished dipolar orderering by forming large ripple-like
318 structures. We have observed antiferroelectric ordering in all three
319 of the equivalent directions on the triangular lattice, and the dipoles
320 have been observed to organize perpendicular to the membrane normal
321 (in the plane of the membrane). It is particularly interesting to
322 note that the ripple-like structures have also been observed to
323 propagate in the three equivalent directions on the lattice, but the
324 {\em direction of ripple propagation is always perpendicular to the
325 dipole director axis}. A snapshot of a typical antiferroelectric
326 rippled structure is shown in Fig. \ref{fig:snapshot}.
327
328 \begin{figure}[ht]
329 \centering
330 \caption{Top and Side views of a representative configuration for the
331 dipolar ordered phase supported on the triangular lattice. Note the
332 antiferroelectric ordering and the long wavelength buckling of the
333 membrane. Dipolar ordering has been observed in all three equivalent
334 directions on the triangular lattice, and the ripple direction is
335 always perpendicular to the director axis for the dipoles.}
336 \includegraphics[width=5.5in]{snapshot.pdf}
337 \label{fig:snapshot}
338 \end{figure}
339
340 Although the snapshot in Fig. \ref{fig:snapshot} gives the appearance
341 of three-row stair-like structures, these appear to be transient. On
342 average, the corrugation of the membrane is a relatively smooth,
343 long-wavelength phenomenon, with occasional steep drops between
344 adjacent lines of anti-aligned dipoles.
345
346 The height-dipole correlation function ($C(r, \cos \theta)$) makes the
347 connection between dipolar ordering and the wave vector of the ripple
348 even more explicit. $C(r, \cos \theta)$ is an angle-dependent pair
349 distribution function. The angle ($\theta$) is defined by the
350 intermolecular vector $\vec{r}_{ij}$ and dipolar-axis of atom $i$,
351 \begin{equation}
352 C(r, \cos \theta) = \langle \sum_{i}
353 \sum_{j} h_i \cdot h_j \delta(r - r_{ij}) \delta(\cos \theta_{ij} - \cos \theta)\rangle / \langle h^2 \rangle
354 \end{equation}
355 where $\cos \theta_{ij} = \hat{\mu}_{i} \cdot \hat{r}_{ij}$ and
356 $\hat{r}_{ij} = \vec{r}_{ij} / r_{ij}$. Fig. \ref{fig:CrossCorrelation}
357 shows contours of this correlation function for both anti-ferroelectric, rippled
358 membranes as well as for the dipole-disordered portion of the phase diagram.
359
360 \begin{figure}[ht]
361 \centering
362 \caption{Contours of the height-dipole correlation function as a function
363 of the dot product between the dipole ($\hat{\mu}$) and inter-dipole
364 separation vector ($\hat{r}$) and the distance ($r$) between the dipoles.
365 Perfect height correlation (contours approaching 1) are present in the
366 ordered phase when the two dipoles are in the same head-to-tail line.
367 Anti-correlation (contours below 0) is only seen when the inter-dipole
368 vector is perpendicular to the dipoles. In the dipole-disordered portion
369 of the phase diagram, there is only weak correlation in the dipole direction
370 and this correlation decays rapidly to zero for intermolecular vectors that are
371 not dipole-aligned.}
372 \includegraphics[width=\linewidth]{height-dipole-correlation.pdf}
373 \label{fig:CrossCorrelation}
374 \end{figure}
375
376 \subsection{Discriminating Ripples from Thermal Undulations}
377
378 In order to be sure that the structures we have observed are actually
379 a rippled phase and not simply thermal undulations, we have computed
380 the undulation spectrum,
381 \begin{equation}
382 h(\vec{q}) = A^{-1/2} \int d\vec{r}
383 h(\vec{r}) e^{-i \vec{q}\cdot\vec{r}}
384 \end{equation}
385 where $h(\vec{r})$ is the height of the membrane at location $\vec{r}
386 = (x,y)$.~\cite{Safran94,Seifert97} In simple (and more complicated)
387 elastic continuum models, it can shown that in the $NVT$ ensemble, the
388 absolute value of the undulation spectrum can be written,
389 \begin{equation}
390 \langle | h(q)|^2 \rangle_{NVT} = \frac{k_B T}{k_c |\vec{q}|^4 +
391 \tilde{\gamma}|\vec{q}|^2},
392 \label{eq:fit}
393 \end{equation}
394 where $k_c$ is the bending modulus for the membrane, and
395 $\tilde{\gamma}$ is the mechanical surface tension.~\cite{Safran94}
396 The systems studied in this paper have essentially zero bending moduli
397 ($k_c$) and relatively large mechanical surface tensions
398 ($\tilde{\gamma}$), so a much simpler form can be written,
399 \begin{equation}
400 \langle | h(q)|^2 \rangle_{NVT} = \frac{k_B T}{\tilde{\gamma}|\vec{q}|^2},
401 \label{eq:fit2}
402 \end{equation}
403
404 The undulation spectrum is computed by superimposing a rectangular
405 grid on top of the membrane, and by assigning height ($h(\vec{r})$)
406 values to the grid from the average of all dipoles that fall within a
407 given $\vec{r}+d\vec{r}$ grid area. Empty grid pixels are assigned
408 height values by interpolation from the nearest neighbor pixels. A
409 standard 2-d Fourier transform is then used to obtain $\langle |
410 h(q)|^2 \rangle$. Alternatively, since the dipoles sit on a Bravais
411 lattice, one could use the heights of the lattice points themselves as
412 the grid for the Fourier transform (without interpolating to a square
413 grid). However, if lateral translational freedom is added to this
414 model, an interpolated method for computing undulation spectra will be
415 required.
416
417 As mentioned above, the best fits to our undulation spectra are
418 obtained by approximating the value of $k_c$ to 0. In
419 Fig. \ref{fig:fit} we show typical undulation spectra for two
420 different regions of the phase diagram along with their fits from the
421 Landau free energy approach (Eq. \ref{eq:fit2}). In the
422 high-temperature disordered phase, the Landau fits can be nearly
423 perfect, and from these fits we can estimate the tension in the
424 surface.
425
426 For the dipolar-ordered triangular lattice near the coexistence
427 temperature, however, we observe long wavelength undulations that are
428 far outliers to the fits. That is, the Landau free energy fits are
429 well within error bars for most of the other points, but can be off by
430 {\em orders of magnitude} for a few low frequency components.
431
432 We interpret these outliers as evidence that these low frequency modes
433 are {\em non-thermal undulations}. We take this as evidence that we
434 are actually seeing a rippled phase developing in this model system.
435
436 \begin{figure}[ht]
437 \centering
438 \caption{Evidence that the observed ripples are {\em not} thermal
439 undulations is obtained from the 2-d fourier transform $\langle
440 |h^{*}(\vec{q})|^2 \rangle$ of the height profile ($\langle h^{*}(x,y)
441 \rangle$). Rippled samples show low-wavelength peaks that are
442 outliers on the Landau free energy fits. Samples exhibiting only
443 thermal undulations fit Eq. \ref{eq:fit} remarkably well.}
444 \includegraphics[width=5.5in]{logFit.pdf}
445 \label{fig:fit}
446 \end{figure}
447
448 \subsection{Effects of Potential Parameters on Amplitude and Wavelength}
449
450 We have used two different methods to estimate the amplitude and
451 periodicity of the ripples. The first method requires projection of
452 the ripples onto a one dimensional rippling axis. Since the rippling
453 is always perpendicular to the dipole director axis, we can define a
454 ripple vector as follows. The largest eigenvector, $s_1$, of the
455 $\mathsf{S}$ matrix in Eq. \ref{eq:opmatrix} is projected onto a
456 planar director axis,
457 \begin{equation}
458 \vec{d} = \left(\begin{array}{c}
459 \vec{s}_1 \cdot \hat{i} \\
460 \vec{s}_1 \cdot \hat{j} \\
461 0
462 \end{array} \right).
463 \end{equation}
464 ($\hat{i}$, $\hat{j}$ and $\hat{k}$ are unit vectors along the $x$,
465 $y$, and $z$ axes, respectively.) The rippling axis is in the plane of
466 the membrane and is perpendicular to the planar director axis,
467 \begin{equation}
468 \vec{q}_{\mathrm{rip}} = \vec{d} \times \hat{k}
469 \end{equation}
470 We can then find the height profile of the membrane along the ripple
471 axis by projecting heights of the dipoles to obtain a one-dimensional
472 height profile, $h(q_{\mathrm{rip}})$. Ripple wavelengths can be
473 estimated from the largest non-thermal low-frequency component in the
474 fourier transform of $h(q_{\mathrm{rip}})$. Amplitudes can be
475 estimated by measuring peak-to-trough distances in
476 $h(q_{\mathrm{rip}})$ itself.
477
478 A second, more accurate, and simpler method for estimating ripple
479 shape is to extract the wavelength and height information directly
480 from the largest non-thermal peak in the undulation spectrum. For
481 large-amplitude ripples, the two methods give similar results. The
482 one-dimensional projection method is more prone to noise (particularly
483 in the amplitude estimates for the distorted lattices). We report
484 amplitudes and wavelengths taken directly from the undulation spectrum
485 below.
486
487 In the triangular lattice ($\gamma = \sqrt{3}$), the rippling is
488 observed for temperatures ($T^{*}$) from $61-122$. The wavelength of
489 the ripples is remarkably stable at 21.4~$\sigma$ for all but the
490 temperatures closest to the order-disorder transition. At $T^{*} =
491 122$, the wavelength drops to 17.1~$\sigma$.
492
493 The dependence of the amplitude on temperature is shown in the top
494 panel of Fig. \ref{fig:Amplitude}. The rippled structures shrink
495 smoothly as the temperature rises towards the order-disorder
496 transition. The wavelengths and amplitudes we observe are
497 surprisingly close to the $\Lambda / 2$ phase observed by Kaasgaard
498 {\it et al.} in their work on PC-based lipids.\cite{Kaasgaard03}
499 However, this is coincidental agreement based on a choice of 7~\AA~as
500 the mean spacing between lipids.
501
502 \begin{figure}[ht]
503 \centering
504 \caption{a) The amplitude $A^{*}$ of the ripples vs. temperature for a
505 triangular lattice. b) The amplitude $A^{*}$ of the ripples vs. dipole
506 strength ($\mu^{*}$) for both the triangular lattice (circles) and
507 distorted lattice (squares). The reduced temperatures were kept
508 fixed at $T^{*} = 94$ for the triangular lattice and $T^{*} = 106$ for
509 the distorted lattice (approximately 2/3 of the order-disorder
510 transition temperature for each lattice).}
511 \includegraphics[width=\linewidth]{properties_sq.pdf}
512 \label{fig:Amplitude}
513 \end{figure}
514
515 The ripples can be made to disappear by increasing the internal
516 surface tension (i.e. by increasing $k_r$ or equivalently, reducing
517 the dipole moment). The amplitude of the ripples depends critically
518 on the strength of the dipole moments ($\mu^{*}$) in Eq. \ref{eq:pot}.
519 If the dipoles are weakened substantially (below $\mu^{*}$ = 20) at a
520 fixed temperature of 94, the membrane loses dipolar ordering
521 and the ripple structures. The ripples reach a peak amplitude of
522 3.7~$\sigma$ at a dipolar strength of 25. We show the dependence
523 of ripple amplitude on the dipolar strength in
524 Fig. \ref{fig:Amplitude}.
525
526 \subsection{Distorted lattices}
527
528 We have also investigated the effect of the lattice geometry by
529 changing the ratio of lattice constants ($\gamma$) while keeping the
530 average nearest-neighbor spacing constant. The antiferroelectric state
531 is accessible for all $\gamma$ values we have used, although the
532 distorted triangular lattices prefer a particular director axis due to
533 the anisotropy of the lattice.
534
535 Our observation of rippling behavior was not limited to the triangular
536 lattices. In distorted lattices the antiferroelectric phase can
537 develop nearly instantaneously in the Monte Carlo simulations, and
538 these dipolar-ordered phases tend to be remarkably flat. Whenever
539 rippling has been observed in these distorted lattices
540 (e.g. $\gamma = 1.875$), we see relatively short ripple wavelengths
541 (14 $\sigma$) and amplitudes of 2.4~$\sigma$. These ripples are
542 weakly dependent on dipolar strength (see Fig. \ref{fig:Amplitude}),
543 although below a dipolar strength of $\mu^{*} = 20$, the membrane
544 loses dipolar ordering and displays only thermal undulations.
545
546 The ripple phase does {\em not} appear at all values of $\gamma$. We
547 have only observed non-thermal undulations in the range $1.625 <
548 \gamma < 1.875$. Outside this range, the order-disorder transition in
549 the dipoles remains, but the ordered dipolar phase has only thermal
550 undulations. This is one of our strongest pieces of evidence that
551 rippling is a symmetry-breaking phenomenon for triangular and
552 nearly-triangular lattices.
553
554 \subsection{Effects of System Size}
555 To evaluate the effect of finite system size, we have performed a
556 series of simulations on the triangular lattice at a reduced
557 temperature of 122, which is just below the order-disorder transition
558 temperature ($T^{*} = 139$). These conditions are in the
559 dipole-ordered and rippled portion of the phase diagram. These are
560 also the conditions that should be most susceptible to system size
561 effects.
562
563 \begin{figure}[ht]
564 \centering
565 \caption{The ripple wavelength (top) and amplitude (bottom) as a
566 function of system size for a triangular lattice ($\gamma=1.732$) at $T^{*} =
567 122$.}
568 \includegraphics[width=\linewidth]{SystemSize.pdf}
569 \label{fig:systemsize}
570 \end{figure}
571
572 There is substantial dependence on system size for small (less than
573 29~$\sigma$) periodic boxes. Notably, there are resonances apparent
574 in the ripple amplitudes at box lengths of 17.3 and 29.5 $\sigma$.
575 For larger systems, the behavior of the ripples appears to have
576 stabilized and is on a trend to slightly smaller amplitudes (and
577 slightly longer wavelengths) than were observed from the 34.3 $\sigma$
578 box sizes that were used for most of the calculations.
579
580 It is interesting to note that system sizes which are multiples of the
581 default ripple wavelength can enhance the amplitude of the observed
582 ripples, but appears to have only a minor effect on the observed
583 wavelength. It would, of course, be better to use system sizes that
584 were many multiples of the ripple wavelength to be sure that the
585 periodic box is not driving the phenomenon, but at the largest system
586 size studied (70 $\sigma$ $\times$ 70 $\sigma$), the number of dipoles
587 (5440) made long Monte Carlo simulations prohibitively expensive.
588
589 \section{Discussion}
590 \label{sec:discussion}
591
592 We have been able to show that a simple dipolar lattice model which
593 contains only molecular packing (from the lattice), anisotropy (in the
594 form of electrostatic dipoles) and a weak surface tension (in the form
595 of a nearest-neighbor harmonic potential) is capable of exhibiting
596 stable long-wavelength non-thermal surface corrugations. The best
597 explanation for this behavior is that the ability of the dipoles to
598 translate out of the plane of the membrane is enough to break the
599 symmetry of the triangular lattice and allow the energetic benefit from
600 the formation of a bulk antiferroelectric phase. Were the weak
601 surface tension absent from our model, it would be possible for the
602 entire lattice to ``tilt'' using $z$-translation. Tilting the lattice
603 in this way would yield an effectively non-triangular lattice which
604 would avoid dipolar frustration altogether. With the surface tension
605 in place, bulk tilt causes a large strain, and the simplest way to
606 release this strain is along line defects. Line defects will result
607 in rippled or sawtooth patterns in the membrane, and allow small
608 ``stripes'' of membrane to form antiferroelectric regions that are
609 tilted relative to the averaged membrane normal.
610
611 Although the dipole-dipole interaction is the major driving force for
612 the long range orientational ordered state, the formation of the
613 stable, smooth ripples is a result of the competition between the
614 surface tension and the dipole-dipole interactions. This statement is
615 supported by the variation in $\mu^{*}$. Substantially weaker dipoles
616 relative to the surface tension can cause the corrugated phase to
617 disappear.
618
619 The packing of the dipoles into a nearly-triangular lattice is clearly
620 an important piece of the puzzle. The dipolar head groups of lipid
621 molecules are sterically (as well as electrostatically) anisotropic,
622 and would not be able to pack in triangular arrangements without the
623 steric interference of adjacent molecular bodies. Since we only see
624 rippled phases in the neighborhood of $\gamma=\sqrt{3}$, this implies
625 that there is a role played by the lipid chains in the organization of
626 the triangularly ordered phases which support ripples in realistic
627 lipid bilayers.
628
629 The most important prediction we can make using the results from this
630 simple model is that if dipolar ordering is driving the surface
631 corrugation, the wave vectors for the ripples should always found to
632 be {\it perpendicular} to the dipole director axis. This prediction
633 should suggest experimental designs which test whether this is really
634 true in the phosphatidylcholine $P_{\beta'}$ phases. The dipole
635 director axis should also be easily computable for the all-atom and
636 coarse-grained simulations that have been published in the literature.
637
638 Our other observation about the ripple and dipolar directionality is
639 that the dipole director axis can be found to be parallel to any of
640 the three equivalent lattice vectors in the triangular lattice.
641 Defects in the ordering of the dipoles can cause the dipole director
642 (and consequently the surface corrugation) of small regions to be
643 rotated relative to each other by 120$^{\circ}$. This is a similar
644 behavior to the domain rotation seen in the AFM studies of Kaasgaard
645 {\it et al.}\cite{Kaasgaard03}
646
647 Although our model is simple, it exhibits some rich and unexpected
648 behaviors. It would clearly be a closer approximation to the reality
649 if we allowed greater translational freedom to the dipoles and
650 replaced the somewhat artificial lattice packing and the harmonic
651 ``surface tension'' with more realistic molecular modeling
652 potentials. What we have done is to present an extremely simple model
653 which exhibits bulk non-thermal corrugation, and our explanation of
654 this rippling phenomenon will help us design more accurate molecular
655 models for corrugated membranes and experiments to test whether
656 rippling is dipole-driven or not.
657 \clearpage
658 \bibliography{ripple}
659 \printfigures
660 \end{document}