[ViewVC] Diff of: group/trunk/ssdePaper/nptSSD.ps

Comparing trunk/ssdePaper/nptSSD.ps (file contents):
Revision 743 by chrisfen, Wed Sep 3 21:36:09 2003 UTC vs.
Revision 757 by chrisfen, Wed Sep 10 15:38:43 2003 UTC

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->
+(melting)h(of)g(b)r(oth)379 1239 y Fq(I)413 1248 y Fp(h)472
->
+y Fr(and)19 b Fq(I)649 1247 y Fp(c)700 1239 y Fr(ice)h(sho)n(w)n
+(ed)f(a)h(densit)n(y)f(maxim)n(um)d(near)j(260)h(K.)g(In)e(most)h
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-<
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->
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+(calculated)g(in)f(sim)n(ulations)h(of)g(other)g(w)n(ater)g(mo)r(dels.)
-<
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->
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-<
+(erimen)n(tal)e(v)n(ery)g(w)n(ell)379 1506 y(in)i(b)r(oth)g(the)g
->
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-<
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->
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-<
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->
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-<
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->
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+(w)g(to)f(main)n(tain)g(or)h(impro)n(v)n(e)e(up)r(on)g(the)h(transp)r
-<
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-<
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-<
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-<
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->
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->
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->
+y Fu(One)24 b(of)h(the)g(most)f(imp)r(ortan)n(t)h(tasks)f(in)h
->
+(sim)n(ulations)e(of)i(bio-)-150 2459 y(c)n(hemical)38
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-<
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-<
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->
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->
+(of)g(the)g(calculations)f(p)r(er-)-150 2650 y(formed)e(in)i(solv)-5
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-<
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-<
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->
+-150 2746 y(b)r(et)n(w)n(een)29 b(solv)n(en)n(t)f(molecules.)42
->
+b(Th)n(us,)29 b(the)h(outcomes)e(of)h(these)-150 2841
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-<
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->
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+(ater,)g(b)r(oth)g(as)g(individual)g(molecules)g(and)-150
-<
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-<
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->
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->
+(explicit)g(solv)n(en)n(t)-150 3128 y(accoun)n(ts)22
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-<
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-<
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->
+(nec-)-150 3223 y(essary)38 b(to)h(simplify)h(the)g(solv)n(en)n(t)e(to)
->
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-<
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-<
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->
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->
+(bio-molecular)d(studies,)-150 3509 y(the)37 b(balance)f(b)r(et)n(w)n
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-<
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-<
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-<
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-<
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->
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->
+(it)h(has)g(resulted)-150 3700 y(in)31 b(a)g(v)-5 b(ariet)n(y)31
->
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->
+y Fn(1{3)1373 3700 y Fu(Man)n(y)g(of)h(these)-150 3796
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-<
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->
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-<
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-<
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->
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->
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-<
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-<
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->
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->
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-<
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-<
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-<
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-<
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-<
+(simplifying)f(calculations)f(to)i(increase)-150 4661
->
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->
+y Fn(3)o(,4)1039 4369 y Fu(One)f(recen)n(tly)h(dev)n(elop)r(ed)-150
->
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->
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->
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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->
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->
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->
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->
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->
+(hard-)-150 5037 y(sphere)48 b(w)n(ater)g(mo)r(del)h(prop)r(osed)e(b)n
->
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->
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->
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->
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-<
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-<
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-<
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->
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->
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->
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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-<
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->
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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-<
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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->
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-<
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->
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->
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->
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->
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->
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-<
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-<
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-<
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-<
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-<
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->
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->
+(A.)h(Darden,)j(Ann)n(u.)d(Rev.)f(Bioph)n(ys.)2145 394
->
+y(Biomol.)27 b(Struct.)h Fh(28)p Fu(,)f(155)g(\(1999\).)2042
->
+y Fn(10)2145 490 y Fu(Y.)42 b(Liu)f(and)g(T.)g(Ic)n(hiy)n(e,)j
->
+(Chem.)e(Ph)n(ys.)e(Lett.)i Fh(256)p Fu(,)i(334)2145
->
+y(\(1996\).)2042 651 y Fn(11)2145 681 y Fu(M.)25
->
+b(P)-7 b(.)24 b(Allen)h(and)g(D.)g(J.)f(Tildesley)-7
->
+b(,)25 b Fm(Computer)j(Simulation)2145 776 y(of)d(Liquids)k
->
+Fu(\(Oxford)20 b(Univ)n(ersit)n(y)g(Press,)h(New)g(Y)-7
->
+b(ork,)22 b(1987\).)2042 842 y Fn(12)2145 872 y Fu(D.)42
->
+b(v)-5 b(an)41 b(der)f(Sp)r(o)r(el,)45 b(P)-7 b(.)41
->
+b(J.)f(v)-5 b(an)41 b(Maaren,)i(and)e(H.)g(J.)g(C.)2145
->
+y(Berendsen,)27 b(J.)h(Chem.)g(Ph)n(ys.)e Fh(111)p
->
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->
+y Fu(W.)j(G.)g(Ho)r(o)n(v)n(er,)e(Ph)n(ys.)h(Rev.)g(A)h
->
+Fh(31)p Fu(\(3\),)g(1695)d(\(1985\).)2042 1128 y Fn(14)2145
->
+y Fu(W.)j(G.)g(Ho)r(o)n(v)n(er,)e(Ph)n(ys.)h(Rev.)g(A)h
->
+Fh(34)p Fu(\(3\),)g(2499)d(\(1986\).)2042 1224 y Fn(15)2145
->
+y Fu(A.)35 b(Dullw)n(eb)r(er,)h(B.)d(Leimkuhler,)j(and)e(R.)g
->
+(McLac)n(hlan,)g(J.)2145 1349 y(Chem.)28 b(Ph)n(ys.)f
->
+Fh(107)p Fu(\(15\),)f(5840)g(\(1997\).)2042 1414 y Fn(16)2145
->
+y Fu(A.)31 b(Kol,)f(B.)g(B.)g(Laird,)g(and)g(B.)g(J.)g
->
+(Leimkuhler,)h(J.)f(Chem.)2145 1540 y(Ph)n(ys.)d Fh(107)p
->
+Fu(\(7\),)g(2580)f(\(1997\).)2042 1605 y Fn(17)2145 1636
->
+y Fu(J.)g(D.)g(Bernal)f(and)h(R.)g(H.)g(F)-7 b(o)n(wler,)26
->
+b(J.)f(Chem.)i(Ph)n(ys.)d Fh(1)p Fu(,)j(515)2145 1731
->
+y(\(1933\).)2042 1796 y Fn(18)2145 1826 y Fu(A.)20 b(Rahman)f(and)g(F.)
->
+g(H.)h(Stillinger,)h(J.)e(Chem.)g(Ph)n(ys.)g Fh(57)p
->
+Fu(\(9\),)2145 1922 y(4009)26 b(\(1972\).)2042 1987 y
->
+Fn(19)2145 2017 y Fu(W.)37 b(L.)f(Jorgensen)f(and)h(C.)g(Jenson,)i(J.)e
->
+(Comput.)h(Chem.)2145 2113 y Fh(19)p Fu(\(10\),)27 b(1179)f(\(1998\).)
->
+2178 y Fn(20)2145 2208 y Fu(L.)35 b(A.)g(B\023)-42
->
+b(aez)34 b(and)h(P)-7 b(.)35 b(Clancy)-7 b(,)36 b(J.)e(Chem.)h(Ph)n
->
+(ys.)f Fh(101)p Fu(\(11\),)2145 2304 y(9837)26 b(\(1994\).)2042
->
+y Fn(21)2145 2399 y Fu(R.)37 b(C.)g(W)-7 b(east,)39
->
+b(ed.,)h Fm(CR)n(C)e(Handb)l(o)l(ok)h(of)g(Chemistry)h(and)2145
->
+y(Physics)50 b Fu(\(CR)n(C)41 b(Press,)j(Inc.,)h(Bo)r(ca)40
->
+b(Raton,)k(FL,)e(1980\),)2145 2590 y(60th)27 b(ed.)2042
->
+y Fn(22)2145 2686 y Fu(Gillen,)33 b(Douglas,)f(and)f(Ho)r(c)n(h,)h
->
+(J.)g(Chem.)g(Ph)n(ys.)e Fh(57)p Fu(,)i(5117)2145 2781
->
+y(\(1972\).)2042 2847 y Fn(23)2145 2877 y Fu(R.)c(Mills,)g(J.)f(Ph)n
->
+(ys.)g(Chem.)h Fh(77)p Fu(\(5\),)f(685)f(\(1973\).)2042
->
+y Fn(24)2145 2972 y Fu(G.)d(Hura,)g(J.)f(M.)h(Sorenson,)f(R.)g(M.)
->
+h(Glaeser,)f(and)g(T.)h(Head-)2145 3068 y(Gordon,)k(J.)g(Chem.)h(Ph)n
->
+(ys.)f Fh(113)p Fu(\(20\),)f(9140)g(\(2000\).)2042 3133
->
+y Fn(25)2145 3163 y Fu(A.)h(K.)e(Sop)r(er)h(and)g(M.)g(G.)g(Phillips,)g
->
+(Chem.)h(Ph)n(ys.)e Fh(107)p Fu(\(1\),)2145 3259 y(47)i(\(1986\).)2042
->
+y Fn(26)2145 3354 y Fu(M.)h(Sprik,)g(J.)f(Chem.)h(Ph)n(ys.)e
->
+Fh(95)p Fu(\(9\),)i(6762)d(\(1991\).)2042 3419 y Fn(27)2145
->
+y Fu(A.)36 b(V.)g(Gubsk)-5 b(a)n(y)n(a)35 b(and)g(P)-7
->
+b(.)35 b(G.)h(Kusalik,)h(J.)e(Chem.)h(Ph)n(ys.)2145 3545
->
+y Fh(117)p Fu(\(11\),)27 b(5290)f(\(2002\).)2042 3610
->
+y Fn(28)2145 3641 y Fu(Y.)e(S.)f(Bady)n(al,)g(M.)g(L.)g(Sab)r(oungi,)g
->
+(D.)h(L.)f(Price,)g(S.)g(D.)h(Shas-)2145 3736 y(tri,)30
+b(D.)g(R.)f(Hae\013ner,)g(and)g(A.)h(K.)f(Sop)r(er,)g(J.)g(Chem.)g(Ph)n
-<
+(ys.)2145 3068 y Fg(112)p Ft(\(21\),)e(9206)f(\(2000\).)2042
-<
+y Fm(28)2145 3163 y Ft(J.)c(Barriol)d(and)j(A.)g(W)-7
->
+(ys.)2145 3831 y Fh(112)p Fu(\(21\),)e(9206)f(\(2000\).)2042
->
+y Fn(29)2145 3927 y Fu(J.)c(Barriol)d(and)j(A.)g(W)-7
+b(eisb)r(ec)n(k)n(er,)22 b(Compt.)g(Rend.)g(Acad.)f(Sc.)2145
-<
+y(P)n(aris)26 b Fg(259)p Ft(,)h(4643)f(\(1964\).)2042
-<
+y Fm(29)2145 3354 y Ft(B.)32 b(R.)g(Bro)r(oks,)g(R.)g(E.)f
-<
+(Bruccoleri,)h(B.)g(D.)g(Olafson,)g(D.)g(J.)2145 3450
->
+y(P)n(aris)26 b Fh(259)p Fu(,)h(4643)f(\(1964\).)2042
->
+y Fn(30)2145 4118 y Fu(B.)32 b(R.)g(Bro)r(oks,)g(R.)g(E.)f
->
+(Bruccoleri,)h(B.)g(D.)g(Olafson,)g(D.)g(J.)2145 4213
+y(States,)27 b(S.)f(Sw)n(aminathan,)g(and)g(M.)g(Karplus,)f(J.)h
-<
+(Comput.)2145 3545 y(Chem.)i Fg(4)p Ft(\(2\),)g(187)e(\(1983\).)p
->
+(Comput.)2145 4309 y(Chem.)i Fh(4)p Fu(\(2\),)g(187)e(\(1983\).)p
+eop
+%%Trailer
+end

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Comparing trunk/ssdePaper/nptSSD.ps (file contents): Revision 743 by chrisfen, Wed Sep 3 21:36:09 2003 UTC vs. Revision 757 by chrisfen, Wed Sep 10 15:38:43 2003 UTC

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Comparing trunk/ssdePaper/nptSSD.ps (file contents):
Revision 743 by chrisfen, Wed Sep 3 21:36:09 2003 UTC vs.
Revision 757 by chrisfen, Wed Sep 10 15:38:43 2003 UTC