| 607 |
|
|
| 608 |
|
\subsection{\label{methodSection:otherSpecialEnsembles}Other Special Ensembles} |
| 609 |
|
|
| 610 |
< |
\subsubsection{\label{methodSection:NPAT}NPAT Ensemble} |
| 610 |
> |
\subsubsection{\label{methodSection:NPAT}\textbf{NPAT Ensemble}} |
| 611 |
|
|
| 612 |
|
A comprehensive understanding of structure¨Cfunction relations of |
| 613 |
|
biological membrane system ultimately relies on structure and |
| 630 |
|
Note that the iterative schemes for NPAT are identical to those |
| 631 |
|
described for the NPTi integrator. |
| 632 |
|
|
| 633 |
< |
\subsubsection{\label{methodSection:NPrT}NP$\gamma$T Ensemble} |
| 633 |
> |
\subsubsection{\label{methodSection:NPrT}\textbf{NP$\gamma$T Ensemble}} |
| 634 |
|
|
| 635 |
|
Theoretically, the surface tension $\gamma$ of a stress free |
| 636 |
|
membrane system should be zero since its surface free energy $G$ is |
| 900 |
|
in time step because of the inertial relaxation time, long-time-step |
| 901 |
|
inertial dynamics (LTID) can be used to investigate the inertial |
| 902 |
|
behavior of the polymer segments in low friction |
| 903 |
< |
regime\cite{Beard2001}. LTID can also deal with the rotational |
| 903 |
> |
regime\cite{Beard2003}. LTID can also deal with the rotational |
| 904 |
|
dynamics for nonskew bodies without translation-rotation coupling by |
| 905 |
|
separating the translation and rotation motion and taking advantage |
| 906 |
|
of the analytical solution of hydrodynamics properties. However, |
