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root/group/trunk/xDissertation/Conclusion.tex
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writing up the dissertation.

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# Content
1 \chapter{\label{chap:conclusion}CONCLUSION}
2
3 This dissertation has shown the efforts to the understanding of the
4 structural properties and phase behavior of lipid membranes. In
5 Ch.~\ref{chap:mc}, we present a simple model for dipolar elastic
6 membranes that gives lattice-bound point dipoles complete
7 orientational freedom as well as translational freedom along one
8 coordinate (out of the plane of the membrane). There is an additional
9 harmonic term which binds each of the dipoles to the six nearest
10 neighbors on either triangular or distorted lattices. The
11 translational freedom of the dipoles allows triangular lattices to
12 find states that break out of the normal orientational disorder of
13 frustrated configurations and which are stabilized by long-range
14 anti-ferroelectric ordering. In order to break out of the frustrated
15 states, the dipolar membranes form corrugated or ``rippled'' phases
16 that make the lattices effectively non-triangular. We observe three
17 common features of the corrugated dipolar membranes: 1) the corrugated
18 phases develop easily when hosted on triangular lattices, 2) the wave
19 vectors for the surface ripples are always found to be perpendicular
20 to the dipole director axis, and 3) on triangular lattices, the dipole
21 director axis is found to be parallel to any of the three equivalent
22 lattice directions.
23
24 Ch.~\ref{chap:md} we developed a more realistic model for lipid
25 molecules compared to the simple point dipole one. To further address
26 the dynamics properties of the ripple phase, the simulation method is
27 switched to molecular dynamics. Symmetric and asymmetric ripple
28 phases have been observed to form in the simulations. The lipid model
29 consists of an dipolar head group and an ellipsoidal tail. Within the
30 limits of this model, an explanation for generalized membrane
31 curvature is a simple mismatch in the size of the heads with the width
32 of the molecular bodies. The persistence of a {\it bilayer} structure
33 requires strong attractive forces between the head groups. One
34 feature of this model is that an energetically favorable orientational
35 ordering of the dipoles can be achieved by out-of-plane membrane
36 corrugation. The corrugation of the surface stabilizes the long range
37 orientational ordering for the dipoles in the head groups which then
38 adopt a bulk anti-ferroelectric state. The structural properties of
39 the ripple phase we observed in the dynamics simulations are
40 consistant to that we observed in the Monte Carlo simuations of the
41 simple point dipole model.
42
43 To extend our simulations of lipid membranes to larger system and
44 longer time scale, an algorithm is developed in Ch.~\ref{chap:ld} for
45 carrying out Langevin dynamics simulations on complex rigid bodies by
46 incorporating the hydrodynamic resistance tensors for arbitrary shapes
47 into an advanced symplectic integration scheme. The integrator gives
48 quantitative agreement with both analytic and approximate hydrodynamic
49 theories for a number of model rigid bodies, and works well at
50 reproducing the solute dynamical properties (diffusion constants, and
51 orientational relaxation times) obtained from explicitly-solvated
52 simulations. A $9$ times larger simulation of the lipid bilayer are
53 carried out for the comparison with the molecular dynamics simulations
54 in Ch.~\ref{chap:md}, the results show the structural stability of the
55 ripple phase.
56
57 The structural properties and the formation mechanism for the ripple
58 phase of lipid membranes are elucidated in this dissertation. However,
59 the importance of the ripple phase in the experimental view is still a
60 mystery, hopefully, this work can contribute some flame to the
61 lighting of the experimental field. Further insights of the phase
62 behavior of the lipid membranes can be obtained by applying a atomic
63 or more detailed molecular model with information of the fatty chains
64 of the lipid molecules.