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Revision 3336 by xsun, Wed Jan 30 16:01:02 2008 UTC vs.
Revision 3363 by xsun, Fri Mar 7 14:20:42 2008 UTC

# Line 1 | Line 1
1 < \documentclass[nosummary,dvips,noindentfirst]{ndthesis}
2 < \usepackage{graphicx}
1 > \documentclass[nosummary]{ndthesis}
2 >
3   \usepackage[tbtags]{amsmath}
4 < \usepackage{amsmath, bm}
4 > \usepackage{amsmath,bm}
5   \usepackage{amssymb}
6   \usepackage{mathrsfs}
7 \usepackage{psfrag}
7   \usepackage{tabularx}
8 + \usepackage{graphicx}
9 + \usepackage{booktabs}
10   \usepackage{enumitem}
11   \usepackage{color}
12   \usepackage{listings}
# Line 13 | Line 14
14   %\usepackage from oopseDoc.tex
15   \usepackage{times}
16   \usepackage{setspace}
17 < \usepackage{tabularx}
18 < \usepackage{longtable}
19 < \lstset{language=C++,frame=TB,basicstyle=\small\ttfamily, %
20 <        xleftmargin=0in, xrightmargin=0in, %captionpos=b,% breaklines=true, %
21 <        abovecaptionskip=0.5cm, belowcaptionskip=0.5cm}
21 < \renewcommand{\lstlistingname}{Scheme}
17 > %\usepackage{longtable}
18 > %\lstset{language=C++,frame=TB,basicstyle=\small\ttfamily, %
19 > %        xleftmargin=0in, xrightmargin=0in, %captionpos=b,% breaklines=true, %
20 > %        abovecaptionskip=0.5cm, belowcaptionskip=0.5cm}
21 > %\renewcommand{\lstlistingname}{Scheme}
22   \includeonly{preview}
23  
24   \begin{document}
# Line 35 | Line 35
35   \newcolumntype{H}{p{0.75in}}
36   \newcolumntype{I}{p{5in}}
37  
38 < \renewcommand{\lstlistlistingname}{SCHEMES}
39 < \renewcommand{\lstlistingname}{Scheme}
38 > %\renewcommand{\lstlistlistingname}{SCHEMES}
39 > %\renewcommand{\lstlistingname}{Scheme}
40   \frontmatter
41  
42   \work{Dissertation}  % Change to ``Thesis'' for Master's thesis
43 < \title{Algorithms for modeling the dynamics and phase transitions of lipid bilayers}
43 > \title{ALGORITHMS FOR MODELING THE DYNAMICS AND PHASE TRANSITIONS OF LIPID BILAYERS}
44   \author{Xiuquan Sun}
45   \degprior{B.S., M.S.}                 % All previously earned degrees
46   \degaward{Doctor of Philosophy}  % What this paper is for
# Line 52 | Line 52
52   %% \copypage              % Uncomment if you want a copyright page
53   \begin{abstract}
54  
55 + I present a dissertation concerning the structural properties and
56 + phase behavior of lipid membranes. At first, I investigated the system
57 + by applying the Monte Carlo simulations on a simple dipolar membrane
58 + model. Secondly, to obtain the dynamics properties of the ripple phase
59 + of lipid membranes, molecular dynamics simulations were performed to a
60 + more realistic molecular lipid model. At last, an algorithm of
61 + Langevin dynamics was developed to inquire into the ripple phase in
62 + the implicit solvent environment by working with colleague.
63 +
64   \end{abstract}
65  
66   \begin{dedication}
67  
68 < To my family.
68 > To my wife, for her unconditional support, and to my family, for their
69 > providence of inspiriting happiness.
70  
71   \end{dedication}
72  
73   \tableofcontents
74   \listoffigures          % If you don't have any figures or tables, comment
75   \listoftables        % out these two lines.
76 < \lstlistoflistings
76 > %\lstlistoflistings
77  
78   \begin{acknowledge}    % acknowledgments go here
79  
80 < I would like to thank my advisor, Dr. Gezelter for his inspiring and
81 < encouraging way to guide me to a deeper understanding of molecular
82 < modeling. Without his encouragement and constant guidance, I could not
83 < have finished this dissertation. I am also grateful to my colleagues
84 < Charles F.~Vardeman II, Christopher J.~Fennell, Teng Lin, Yang Zheng,
85 < Kyle Daily, Kyle S.~Haygarth, Matthew A.~Meineke, Dan Combest, Pat
86 < Conforti, and Megan Sprague, who were always here for technical help
87 < and moral support. Last, but not least, I thank my family: my fater,
88 < Jianguo Sun, and my mother, Yumei Lin, for unconditional support and
89 < encouragement to pursue my dreams, even when they went beyond
90 < boundaries of language and geography. My wife, Yingxin Jiang, for her
81 < understanding and love during the past few years. Her support and
82 < encouragement was in the end what made this dissertation possible.
80 > I would like to thank my advisor, J.~Daniel Gezelter, who guided me
81 > into the field of my interests, helped me complete all of the work
82 > with his great patience and broad knowledge. I am also grateful to my
83 > colleagues Teng Lin, Charles F.~Vardeman II, Shenyu Kuang, Chunlei Li,
84 > Christie Puglis, Patrick Holvey, Matthew A.~Meineke, Christopher
85 > J.~Fennell, Yang Zheng, Kyle Daily, Kyle S.~Haygarth, Jennifer Morton,
86 > who were always here for technical support and helpful
87 > suggestions. Finally, I would like to thank my family: my father,
88 > Jianguo Sun, and my mother, Yumei Lin, for their understanding and
89 > support on the distant other side of the ocean. And my wife, Yingxin,
90 > this dissertation could not have been finished without her love.
91  
92   \end{acknowledge}
93  

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