| 1 |
\documentclass[nosummary]{ndthesis} |
| 2 |
|
| 3 |
\usepackage[tbtags]{amsmath} |
| 4 |
\usepackage{amsmath,bm} |
| 5 |
\usepackage{amssymb} |
| 6 |
\usepackage{mathrsfs} |
| 7 |
\usepackage{tabularx} |
| 8 |
\usepackage{graphicx} |
| 9 |
\usepackage{booktabs} |
| 10 |
\usepackage{enumitem} |
| 11 |
\usepackage{color} |
| 12 |
\usepackage{listings} |
| 13 |
\usepackage{cite} |
| 14 |
%\usepackage from oopseDoc.tex |
| 15 |
\usepackage{times} |
| 16 |
\usepackage{setspace} |
| 17 |
%\usepackage{longtable} |
| 18 |
%\lstset{language=C++,frame=TB,basicstyle=\small\ttfamily, % |
| 19 |
% xleftmargin=0in, xrightmargin=0in, %captionpos=b,% breaklines=true, % |
| 20 |
% abovecaptionskip=0.5cm, belowcaptionskip=0.5cm} |
| 21 |
%\renewcommand{\lstlistingname}{Scheme} |
| 22 |
\includeonly{preview} |
| 23 |
|
| 24 |
\begin{document} |
| 25 |
|
| 26 |
%\newcolumntype{A}{p{1.5in}} |
| 27 |
%\newcolumntype{B}{p{0.75in}} |
| 28 |
%\newcolumntype{C}{p{1.5in}} |
| 29 |
%\newcolumntype{D}{p{2in}} |
| 30 |
|
| 31 |
%\newcolumntype{E}{p{0.5in}} |
| 32 |
%\newcolumntype{F}{p{1.5in}} |
| 33 |
%\newcolumntype{G}{p{3.25in}} |
| 34 |
|
| 35 |
%\newcolumntype{H}{p{0.75in}} |
| 36 |
%\newcolumntype{I}{p{5in}} |
| 37 |
|
| 38 |
%\renewcommand{\lstlistlistingname}{SCHEMES} |
| 39 |
%\renewcommand{\lstlistingname}{Scheme} |
| 40 |
\frontmatter |
| 41 |
|
| 42 |
\work{Dissertation} % Change to ``Thesis'' for Master's thesis |
| 43 |
\title{ALGORITHMS FOR MODELING THE DYNAMICS AND PHASE TRANSITIONS OF LIPID BILAYERS} |
| 44 |
\author{Xiuquan Sun} |
| 45 |
\degprior{B.S., M.S.} % All previously earned degrees |
| 46 |
\degaward{Doctor of Philosophy} % What this paper is for |
| 47 |
\advisor{J. Daniel Gezelter} % supervisor/director/advisor |
| 48 |
%% \advisorB{} % second supervisor/director/advisor (if present) |
| 49 |
\department{Chemistry and Biochemistry} % Dept. granting the degree |
| 50 |
|
| 51 |
\maketitle % Uncomment to get the title page printed out |
| 52 |
%% \copypage % Uncomment if you want a copyright page |
| 53 |
\begin{abstract} |
| 54 |
|
| 55 |
I present a dissertation concerning the structural properties and |
| 56 |
phase behavior of lipid membranes. At first, I investigated the system |
| 57 |
by applying the Monte Carlo simulations on a simple dipolar membrane |
| 58 |
model. Secondly, to obtain the dynamics properties of the ripple phase |
| 59 |
of lipid membranes, molecular dynamics simulations were performed to a |
| 60 |
more realistic molecular lipid model. At last, an algorithm of |
| 61 |
Langevin dynamics was developed to inquire into the ripple phase in |
| 62 |
the implicit solvent environment by working with colleague. |
| 63 |
|
| 64 |
\end{abstract} |
| 65 |
|
| 66 |
\begin{dedication} |
| 67 |
|
| 68 |
To my wife, for her unconditional support, and to my family, for their |
| 69 |
providence of inspiriting happiness. |
| 70 |
|
| 71 |
\end{dedication} |
| 72 |
|
| 73 |
\tableofcontents |
| 74 |
\listoffigures % If you don't have any figures or tables, comment |
| 75 |
\listoftables % out these two lines. |
| 76 |
%\lstlistoflistings |
| 77 |
|
| 78 |
\begin{acknowledge} % acknowledgments go here |
| 79 |
|
| 80 |
I would like to thank my advisor, J.~Daniel Gezelter, who guided me |
| 81 |
into the field of my interests, helped me complete all of the work |
| 82 |
with his great patience and broad knowledge. I am also grateful to my |
| 83 |
colleagues Teng Lin, Charles F.~Vardeman II, Shenyu Kuang, Chunlei Li, |
| 84 |
Christie Puglis, Patrick Holvey, Matthew A.~Meineke, Christopher |
| 85 |
J.~Fennell, Yang Zheng, Kyle Daily, Kyle S.~Haygarth, Jennifer Morton, |
| 86 |
who were always here for technical support and helpful |
| 87 |
suggestions. Finally, I would like to thank my family: my father, |
| 88 |
Jianguo Sun, and my mother, Yumei Lin, for their understanding and |
| 89 |
support on the distant other side of the ocean. And my wife, Yingxin, |
| 90 |
this dissertation could not have been finished without her love. |
| 91 |
|
| 92 |
\end{acknowledge} |
| 93 |
|
| 94 |
\mainmatter |
| 95 |
|
| 96 |
%\include{Introduction} |
| 97 |
%\include{mc} |
| 98 |
%\include{md} |
| 99 |
%\include{ld} |
| 100 |
%\include{Conclusion} |
| 101 |
%\include{Appendix} |
| 102 |
%\include{phdBib} |
| 103 |
|
