OpenMD 3.0
Molecular Dynamics in the Open
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RigidBodyStamp.hpp
1/*
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31 * SUPPORT OPEN SCIENCE! If you use OpenMD or its source code in your
32 * research, please cite the appropriate papers when you publish your
33 * work. Good starting points are:
34 *
35 * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
36 * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
37 * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
38 * [4] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
39 * [5] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
40 * [6] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
41 * [7] Lamichhane, Newman & Gezelter, J. Chem. Phys. 141, 134110 (2014).
42 * [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
43 */
44
45#ifndef TYPES_RIGIDBODYSTAMP_HPP
46#define TYPES_RIGIDBODYSTAMP_HPP
47
48#include "types/DataHolder.hpp"
49
50namespace OpenMD {
51
52 class RigidBodyStamp : public DataHolder {
53 public:
54 RigidBodyStamp(int index);
55 int getIndex() { return index_; }
56
57 int getMemberAt(int index) { return members_.at(index); }
58 size_t getNMembers() { return members_.size(); }
59 std::vector<int> getMembers() { return members_; }
60
61 bool setMembers(const std::vector<int>& members) {
62 members_ = members;
63 return true;
64 }
65
66 virtual void validate();
67
68 private:
69 int index_;
70 std::vector<int> members_;
71 };
72} // namespace OpenMD
73
74#endif
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.