OpenMD 3.0
Molecular Dynamics in the Open
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ZconsStruct.hpp
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35 * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
36 * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
37 * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
38 * [4] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
39 * [5] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
40 * [6] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
41 * [7] Lamichhane, Newman & Gezelter, J. Chem. Phys. 141, 134110 (2014).
42 * [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
43 */
44
45#ifndef CONSTRAINTS_ZCONSSTRUCT_HPP
46#define CONSTRAINTS_ZCONSSTRUCT_HPP
47
49
50namespace OpenMD {
51
53 RealType zTargetPos; /**< target zconstraint position */
54 RealType kz; /**< force constant */
55 RealType cantVel; /**< The velocity of cantilever */
56 };
57
59 Molecule* mol;
60 ZconstraintParam param;
61 RealType fz;
62 RealType zpos;
63 RealType cantPos; /**< current position of cantilever */
64 RealType endFixingTime;
65 };
66
67 struct ZconsData {
68 int zmolIndex;
69 RealType zforce;
70 RealType zpos;
71 RealType zconsPos;
72 };
73} // namespace OpenMD
74
75#endif
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.
RealType cantPos
current position of cantilever
RealType zTargetPos
target zconstraint position
RealType kz
force constant
RealType cantVel
The velocity of cantilever.