- Generated on Thu Dec 28 2023 13:22:56 for OpenMD by
1.10.0
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OpenMD 3.0
Molecular Dynamics in the Open
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This is the complete list of members for OpenMD::HBondJump, including all inherited members.
| acceptor_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| acceptorStartFrame_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| calcCorrVal(int, int, int, int) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| calcCorrVal(int, int) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| common_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| computeFrame(int istep) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protectedvirtual |
| computeProperty1(int) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty1(int, Molecule *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty1(int, StuntDouble *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty1(int, Bond *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty2(int) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty2(int, Molecule *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty2(int, StuntDouble *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| computeProperty2(int, Bond *) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | inlineprotectedvirtual |
| correlation() (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protectedvirtual |
| DynamicProperty() (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
| findHBonds(int frame) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protectedvirtual |
| getOutputFileName() const (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
| GIDtoH_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| HBondJump(SimInfo *info, const std::string &filename, const std::string &sele1, const std::string &sele2, double OOCut, double thetaCut, double OHCut) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | |
| hydrogen_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| isHBond(Vector3d donorPos, Vector3d hPos, Vector3d acceptorPos) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| lastAcceptor_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| OHCut_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| OOCut_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| outputFilename_ (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | protected |
| postCorrelate() (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protectedvirtual |
| processNonOverlapping(int frame, SelectionManager &sman1, SelectionManager &sman2) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| processOverlapping(int frame, SelectionManager &sman) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| registerHydrogen(int frame, int hIndex) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protectedvirtual |
| registerHydrogenBond(int frame, int index, int hIndex, int aIndex) (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| sele1_minus_common_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| sele2_minus_common_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| selected_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| setOutputName(const std::string &filename) (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
| thetaCut_ (defined in OpenMD::HBondJump) | OpenMD::HBondJump | protected |
| ~DynamicProperty()=default (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | virtual |
1.10.0