[Openmd-users] Problem withn installation

[Cecil Ouma]

Hi

Please assist me with installation of openMD. 

This is what I did

=================================
[cecil at localhost build-openMD]$ cmake ../openmd-2.2
-- QHULL found (include: /usr/local/include, lib: optimized;/usr/local/lib/libqhullstatic.a;debug;/usr/local/lib/libqhullstatic.a)
-- 
-- ========== OpenMD Build Information ==========
-- Current revision ........... = Release
-- CMAKE_SYSTEM ............... = Linux-3.16.3-200.fc20.x86_64
-- ==============================================
-- CMAKE_BUILD_TYPE ........... = Release
-- CMAKE_INSTALL_PREFIX ....... = /usr/local/openmd
-- Build as SINGLE_PRECISION .. = OFF
-- CMAKE_CXX_COMPILER ......... = /usr/bin/c++
-- MPI_CXX_COMPILER ........... = /usr/lib64/openmpi/bin/mpicxx
-- MPI_CXX_INCLUDE_PATH ....... = /usr/include/openmpi-x86_64
-- MPI_CXX_LIBRARIES .......... = /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so
-- OPENBABEL2_ROOT ............ = 
-- OPENBABEL2_INCLUDE_DIR ..... = /usr/include/openbabel-2.0
-- OPENBABEL2_LIBRARIES ....... = /usr/lib64/libopenbabel.so
-- QHULL_ROOT ................. = 
-- QHULL_INCLUDE_DIR .......... = /usr/local/include
-- QHULL_LIBRARIES ............ = optimized;/usr/local/lib/libqhullstatic.a;debug;/usr/local/lib/libqhullstatic.a
-- ZLIB_ROOT .................. = 
-- ZLIB_INCLUDE_DIR ........... = /usr/include
-- ZLIB_LIBRARIES ............. = /usr/lib64/libz.so
-- FFTW3_ROOT ................. = 
-- FFTW3_INCLUDE_DIR .......... = /usr/include
-- FFTW3_LIBRARIES ............ = /usr/lib64/libfftw3.so
-- PERL_EXECUTABLE ............ = /usr/bin/perl
-- PYTHON_EXECUTABLE .......... = /usr/bin/python
-- DOXYGEN_EXECUTABLE ......... = /usr/bin/doxygen
-- 
-- To override these options, add -D{OPTION_NAME}=... to the cmake command
-- Particularly useful defines are for:
-- 
--   -DCMAKE_INSTALL_PREFIX=/usr/local/openmd (where OpenMD will be installed)
--        -DOPENBABEL2_ROOT=/path/to/openbabel
--             -DQHULL_ROOT=/path/to/qhull
--             -DFFTW3_ROOT=/path/to/fftw3
-- 
-- To build and install OpenMD, enter "make" and "make install"
-- 
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cecil/build-openMD
=====================================================

when I type make i get this among others
...
...
...
lib/libopenmd_parallel.a(Problem.cpp.o): In function `QuantLib::Problem::computeGradientNormValue(OpenMD::DynamicVector<double, std::allocator<double> >&)':
Problem.cpp:(.text+0xc4): undefined reference to `ompi_mpi_comm_world'
Problem.cpp:(.text+0xca): undefined reference to `ompi_mpi_op_sum'
Problem.cpp:(.text+0xcf): undefined reference to `ompi_mpi_double'
Problem.cpp:(.text+0xe3): undefined reference to `MPI_Allreduce'
collect2: error: ld returned 1 exit status
make[2]: *** [bin/openmd_MPI] Error 1
make[1]: *** [CMakeFiles/openmd_MPI.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....




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