OpenMD 3.1
Molecular Dynamics in the Open
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FluctuatingChargeDamped.hpp
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35 * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
36 * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
37 * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
38 * [4] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
39 * [5] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
40 * [6] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
41 * [7] Lamichhane, Newman & Gezelter, J. Chem. Phys. 141, 134110 (2014).
42 * [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
43 */
44
45#ifndef INTEGRATORS_FLUCTUATINGCHARGEDAMPED_HPP
46#define INTEGRATORS_FLUCTUATINGCHARGEDAMPED_HPP
47
48#include "flucq/FluctuatingChargePropagator.hpp"
49
50namespace OpenMD {
51
53 public:
55
56 RealType getDragCoefficient() { return drag_; }
57
58 void setDragCoefficient(RealType drag) { drag_ = drag; }
59
60 int getMaxIterationNumber() { return maxIterNum_; }
61
62 void setMaxIterationNumber(int maxIter) { maxIterNum_ = maxIter; }
63
64 RealType getForceTolerance() { return forceTolerance_; }
65
66 void setForceTolerance(RealType tol) { forceTolerance_ = tol; }
67
68 private:
69 virtual void initialize();
70 virtual void moveA();
71 virtual void applyConstraints();
72 virtual void moveB();
73 virtual void updateSizes();
74 virtual RealType calcConservedQuantity();
75
76 int maxIterNum_;
77 RealType forceTolerance_;
78 RealType drag_;
79 RealType dt2_;
80 RealType dt_;
81
82 Snapshot* snap {nullptr};
83 };
84} // namespace OpenMD
85
86#endif
abstract class for propagating fluctuating charge variables
One of the heavy-weight classes of OpenMD, SimInfo maintains objects and variables relating to the cu...
Definition SimInfo.hpp:93
The Snapshot class is a repository storing dynamic data during a Simulation.
Definition Snapshot.hpp:147
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.