OpenMD 3.2
Molecular Dynamics in the Open
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FluctuatingChargeForces.hpp
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32 * research, please cite the following paper when you publish your work:
33 *
34 * [1] Drisko et al., J. Open Source Softw. 9, 7004 (2024).
35 *
36 * Good starting points for code and simulation methodology are:
37 *
38 * [2] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
39 * [3] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
40 * [4] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
41 * [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
42 * [6] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
43 * [7] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
44 * [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
45 * [9] Drisko & Gezelter, J. Chem. Theory Comput. 20, 4986-4997 (2024).
46 */
47
48#ifndef INTEGRATORS_FLUCTUATINGCHARGEFORCES_HPP
49#define INTEGRATORS_FLUCTUATINGCHARGEFORCES_HPP
50
51#include "brains/SimInfo.hpp"
52#include "math/Polynomial.hpp"
53
54using namespace std;
55namespace OpenMD {
56
58 RealType hardness;
59 RealType electronegativity;
60 int slaterN;
61 RealType slaterZeta;
62 RealType curvature;
63 DoublePolynomial vself_;
64 };
65
66 class FluctuatingChargeForces {
67 public:
68 FluctuatingChargeForces(SimInfo* info);
69 void setForceField(ForceField* ff) { forceField_ = ff; };
70 void setSimulatedAtomTypes(AtomTypeSet& simtypes) { simTypes_ = simtypes; };
71 void getSelfInteraction(int atid, RealType charge, RealType& potential,
72 RealType& force);
73 void addType(AtomType* atomType);
74
75 protected:
76 void initialize();
77 SimInfo* info_ {nullptr};
78 ForceField* forceField_;
79 AtomTypeSet simTypes_;
80
82
83 set<int>
84 FQtypes; /**< The set of AtomType idents that are fluctuating types */
85 vector<int>
86 FQtids; /**< The mapping from AtomType ident -> fluctuating ident */
87 vector<FluctuatingChargeAtomData>
88 FQMap; /**< data about fluctuating types */
89
90 bool initialized_;
91 };
92} // namespace OpenMD
93
94#endif
AtomType is what OpenMD looks to for unchanging data about an atom.
Definition AtomType.hpp:69
vector< FluctuatingChargeAtomData > FQMap
data about fluctuating types
set< int > FQtypes
The set of AtomType idents that are fluctuating types.
vector< int > FQtids
The mapping from AtomType ident -> fluctuating ident.
One of the heavy-weight classes of OpenMD, SimInfo maintains objects and variables relating to the cu...
Definition SimInfo.hpp:96
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.