OpenMD 3.1
Molecular Dynamics in the Open
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NVT.hpp
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35 * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
36 * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
37 * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
38 * [4] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
39 * [5] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
40 * [6] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
41 * [7] Lamichhane, Newman & Gezelter, J. Chem. Phys. 141, 134110 (2014).
42 * [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
43 */
44
45/**
46 * @file NVT.hpp
47 * @author tlin
48 * @date 11/19/2004
49 * @version 1.0
50 */
51
52#ifndef INTEGRATOR_NVT_HPP
53#define INTEGRATOR_NVT_HPP
54
55#include "integrators/VelocityVerletIntegrator.hpp"
56
57namespace OpenMD {
58
59 /**
60 * @class NVT NVT.hpp "integrators/NVT.hpp"
61 * Basic thermostating via Hoover, Phys.Rev.A, 1985, Vol. 31 (5) 1695-1697
62 * @todo document
63 */
65 public:
66 NVT(SimInfo* info);
67
68 int getMaxIterationNumber() { return maxIterNum_; }
69
70 void setMaxIterationNumber(int maxIter) { maxIterNum_ = maxIter; }
71
72 RealType getTauThermostat() { return tauThermostat_; }
73
74 void setTauThermostat(RealType tt) { tauThermostat_ = tt; }
75
76 RealType getTargetTemp() { return targetTemp_; }
77
78 void setTargetTemp(RealType tt) { targetTemp_ = tt; }
79
80 RealType getChiTolerance() { return chiTolerance_; }
81
82 void setChiTolerance(RealType tol) { chiTolerance_ = tol; }
83
84 protected:
85 virtual void moveA();
86
87 virtual void moveB();
88
89 virtual void doUpdateSizes();
90
91 virtual void resetIntegrator();
92
93 private:
94 virtual RealType calcConservedQuantity();
95
96 int maxIterNum_;
97 RealType targetTemp_;
98 RealType tauThermostat_;
99 RealType chiTolerance_;
100
101 std::vector<Vector3d> oldVel_;
102 std::vector<Vector3d> oldJi_;
103 };
104} // namespace OpenMD
105
106#endif // INTEGRATOR_NVT_HPP
Basic thermostating via Hoover, Phys.Rev.A, 1985, Vol.
Definition NVT.hpp:64
One of the heavy-weight classes of OpenMD, SimInfo maintains objects and variables relating to the cu...
Definition SimInfo.hpp:93
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.