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NVT.hpp
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/*
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* Copyright (c) 2004-present, The University of Notre Dame. All rights
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* reserved.
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*
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are met:
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*
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* 1. Redistributions of source code must retain the above copyright notice,
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* this list of conditions and the following disclaimer.
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*
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* 2. Redistributions in binary form must reproduce the above copyright notice,
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* this list of conditions and the following disclaimer in the documentation
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* and/or other materials provided with the distribution.
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*
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* 3. Neither the name of the copyright holder nor the names of its
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* contributors may be used to endorse or promote products derived from
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* this software without specific prior written permission.
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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* POSSIBILITY OF SUCH DAMAGE.
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*
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* SUPPORT OPEN SCIENCE! If you use OpenMD or its source code in your
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* research, please cite the following paper when you publish your work:
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*
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* [1] Drisko et al., J. Open Source Softw. 9, 7004 (2024).
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*
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* Good starting points for code and simulation methodology are:
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*
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* [2] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).
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* [3] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).
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* [4] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008).
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* [5] Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
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* [6] Kuang & Gezelter, Mol. Phys., 110, 691-701 (2012).
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* [7] Lamichhane, Gezelter & Newman, J. Chem. Phys. 141, 134109 (2014).
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* [8] Bhattarai, Newman & Gezelter, Phys. Rev. B 99, 094106 (2019).
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* [9] Drisko & Gezelter, J. Chem. Theory Comput. 20, 4986-4997 (2024).
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*/
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/**
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* @file NVT.hpp
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* @author tlin
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* @date 11/19/2004
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* @version 1.0
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*/
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#ifndef INTEGRATOR_NVT_HPP
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#define INTEGRATOR_NVT_HPP
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#include "integrators/VelocityVerletIntegrator.hpp"
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namespace
OpenMD
{
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/**
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* @class NVT NVT.hpp "integrators/NVT.hpp"
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* Basic thermostating via Hoover, Phys.Rev.A, 1985, Vol. 31 (5) 1695-1697
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* @todo document
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*/
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class
NVT :
public
VelocityVerletIntegrator {
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public
:
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NVT(
SimInfo
* info);
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int
getMaxIterationNumber() {
return
maxIterNum_; }
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void
setMaxIterationNumber(
int
maxIter) { maxIterNum_ = maxIter; }
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RealType getTauThermostat() {
return
tauThermostat_; }
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void
setTauThermostat(RealType tt) { tauThermostat_ = tt; }
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RealType getTargetTemp() {
return
targetTemp_; }
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void
setTargetTemp(RealType tt) { targetTemp_ = tt; }
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RealType getChiTolerance() {
return
chiTolerance_; }
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void
setChiTolerance(RealType tol) { chiTolerance_ = tol; }
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protected
:
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virtual
void
moveA();
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virtual
void
moveB();
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virtual
void
doUpdateSizes();
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virtual
void
resetIntegrator();
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private
:
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virtual
RealType calcConservedQuantity();
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int
maxIterNum_;
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RealType targetTemp_;
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RealType tauThermostat_;
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RealType chiTolerance_;
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std::vector<Vector3d> oldVel_;
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std::vector<Vector3d> oldJi_;
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};
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}
// namespace OpenMD
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#endif
// INTEGRATOR_NVT_HPP
OpenMD::SimInfo
One of the heavy-weight classes of OpenMD, SimInfo maintains objects and variables relating to the cu...
Definition
SimInfo.hpp:96
OpenMD
This basic Periodic Table class was originally taken from the data.cpp file in OpenBabel.
Definition
ActionCorrFunc.cpp:63
integrators
NVT.hpp
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