OpenMD 3.1
Molecular Dynamics in the Open
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This is the complete list of members for OpenMD::NPA, including all inherited members.
calcForce() (defined in OpenMD::Integrator) | OpenMD::Integrator | protectedvirtual |
currReset (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
currRNEMD (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
currSample (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
currStatus (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
currThermal (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
doUpdateSizes() (defined in OpenMD::NPT) | OpenMD::NPT | protectedvirtual |
dt (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
dt2 (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
dumpWriter (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
eta (defined in OpenMD::NPA) | OpenMD::NPA | protected |
etaTolerance (defined in OpenMD::NPT) | OpenMD::NPT | protected |
finalize() (defined in OpenMD::Integrator) | OpenMD::Integrator | protectedvirtual |
fkBT (defined in OpenMD::NPT) | OpenMD::NPT | protected |
flucQ_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
forceMan_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
getChiTolerance() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getEtaTolerance() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getMaxIterationNumber() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getTargetPressure() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getTargetTemp() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getTauBarostat() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
getTauThermostat() (defined in OpenMD::NPT) | OpenMD::NPT | inline |
info_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
initialize() (defined in OpenMD::Integrator) | OpenMD::Integrator | protectedvirtual |
instaPress (defined in OpenMD::NPT) | OpenMD::NPT | protected |
instaTemp (defined in OpenMD::NPT) | OpenMD::NPT | protected |
instaVol (defined in OpenMD::NPT) | OpenMD::NPT | protected |
integrate() (defined in OpenMD::Integrator) | OpenMD::Integrator | |
Integrator(SimInfo *info) (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
maxIterNum_ (defined in OpenMD::NPT) | OpenMD::NPT | protected |
needPotential (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
needReset (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
needVelocityScaling (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
needVirial (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
NkBT (defined in OpenMD::NPT) | OpenMD::NPT | protected |
NPA(SimInfo *info) (defined in OpenMD::NPA) | OpenMD::NPA | inline |
NPT(SimInfo *info) (defined in OpenMD::NPT) | OpenMD::NPT | |
oldJi (defined in OpenMD::NPT) | OpenMD::NPT | protected |
oldPos (defined in OpenMD::NPT) | OpenMD::NPT | protected |
oldVel (defined in OpenMD::NPT) | OpenMD::NPT | protected |
postStep() (defined in OpenMD::Integrator) | OpenMD::Integrator | protectedvirtual |
press (defined in OpenMD::NPT) | OpenMD::NPT | protected |
preStep() (defined in OpenMD::Integrator) | OpenMD::Integrator | protectedvirtual |
progressBar (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
rattle_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
resetEta() (defined in OpenMD::NPT) | OpenMD::NPT | protectedvirtual |
resetIntegrator() (defined in OpenMD::NPT) | OpenMD::NPT | protectedvirtual |
resetTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
rnemd_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
RNEMD_exchangeTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
rotAlgo_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
runTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
sampleTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
saveConservedQuantity() (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
setChiTolerance(RealType tol) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setEtaTolerance(RealType tol) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setFluctuatingChargePropagator(FluctuatingChargePropagator *prop) (defined in OpenMD::Integrator) | OpenMD::Integrator | |
setMaxIterationNumber(int maxIter) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setRNEMD(std::unique_ptr< RNEMD::RNEMD > rnemd) (defined in OpenMD::Integrator) | OpenMD::Integrator | |
setRotationAlgorithm(RotationAlgorithm *algo) (defined in OpenMD::Integrator) | OpenMD::Integrator | |
setTargetPressure(RealType tp) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setTargetTemp(RealType tt) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setTauBarostat(RealType tb) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setTauThermostat(RealType tt) (defined in OpenMD::NPT) | OpenMD::NPT | inline |
setVelocitizer(std::unique_ptr< Velocitizer > velocitizer) (defined in OpenMD::Integrator) | OpenMD::Integrator | |
simParams (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
snap (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
stats (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
statusTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
statWriter (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
step() | OpenMD::NPT | inlineprotectedvirtual |
targetPressure (defined in OpenMD::NPT) | OpenMD::NPT | protected |
targetScalingTemp (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
targetTemp (defined in OpenMD::NPT) | OpenMD::NPT | protected |
tauBarostat (defined in OpenMD::NPT) | OpenMD::NPT | protected |
tauThermostat (defined in OpenMD::NPT) | OpenMD::NPT | protected |
tb2 (defined in OpenMD::NPT) | OpenMD::NPT | protected |
thermalTime (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
thermo (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
thermostat (defined in OpenMD::NPT) | OpenMD::NPT | protected |
tt2 (defined in OpenMD::NPT) | OpenMD::NPT | protected |
updateSizes() (defined in OpenMD::Integrator) | OpenMD::Integrator | |
useRNEMD (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
velocitizer_ (defined in OpenMD::Integrator) | OpenMD::Integrator | protected |
VelocityVerletIntegrator(SimInfo *info) (defined in OpenMD::VelocityVerletIntegrator) | OpenMD::VelocityVerletIntegrator | protected |
~Integrator() | OpenMD::Integrator | virtual |