autoCorrFunc_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
calcCorrVal(int frame1, int frame2)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
calcCorrVal(int frame1, int frame2, int id1, int id2)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeFrame(int frame) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
computeProperty1(int frame)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty1(int frame, Molecule *mol)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty1(int frame, StuntDouble *sd)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty1(int frame, Bond *b)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty2(int frame)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty2(int frame, Molecule *mol)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty2(int frame, StuntDouble *sd)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
computeProperty2(int frame, Bond *b)=0 (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedpure virtual |
correlateFrames(int frame1, int frame2, int timeBin) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
correlation() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
corrFuncType_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
count_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
currentSnapshot_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
deltaTime_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
doAtomicProperties_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
doBondProperties_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
doCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | virtual |
doMolecularProperties_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
doObjectProperties_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
doSystemProperties_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
dumpFilename_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
DynamicProperty() (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
evaluator1_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
evaluator2_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
getCorrFuncType() const (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | inline |
getOutputFileName() const (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
histogram_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
info_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
labelString_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
nFrames_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
nTimeBins_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
outputFilename_ (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | protected |
paramString_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
postCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
preCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
progressBar_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
reader_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
sele1ToIndex_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
sele2ToIndex_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
selectionScript1_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
selectionScript2_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
seleMan1_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
seleMan2_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
setCorrFuncType(const std::string &type) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | inline |
setLabelString(const std::string &label) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | inline |
setOutputName(const std::string &filename) (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | inline |
setParameterString(const std::string ¶ms) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | inline |
TimeCorrFunc(SimInfo *info, const std::string &filename, const std::string &sele1, const std::string &sele2) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | |
times_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
uniqueSelections_ (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
validateSelection(SelectionManager &seleMan) (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
writeCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protectedvirtual |
writeCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
writeCorrelate() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | protected |
~DynamicProperty()=default (defined in OpenMD::DynamicProperty) | OpenMD::DynamicProperty | virtual |
~TimeCorrFunc() (defined in OpenMD::TimeCorrFunc< T >) | OpenMD::TimeCorrFunc< T > | inlinevirtual |