OpenMD 3.1
Molecular Dynamics in the Open
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nanoparticleBuilderCmd.hpp
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1/** @file nanoparticleBuilderCmd.hpp
2 * @brief The header file for the command line option parser
3 * generated by GNU Gengetopt version 2.22.6
4 * http://www.gnu.org/software/gengetopt.
5 * DO NOT modify this file, since it can be overwritten
6 * @author GNU Gengetopt by Lorenzo Bettini */
7
8#ifndef NANOPARTICLEBUILDERCMD_H
9#define NANOPARTICLEBUILDERCMD_H
10
11/* If we use autoconf. */
12#ifdef HAVE_CONFIG_H
13#include "config.h"
14#endif
15
16#include <stdio.h> /* for FILE */
17
18#ifdef __cplusplus
19extern "C" {
20#endif /* __cplusplus */
21
22#ifndef CMDLINE_PARSER_PACKAGE
23/** @brief the program name (used for printing errors) */
24#define CMDLINE_PARSER_PACKAGE "nanoparticleBuilder"
25#endif
26
27#ifndef CMDLINE_PARSER_PACKAGE_NAME
28/** @brief the complete program name (used for help and version) */
29#define CMDLINE_PARSER_PACKAGE_NAME "nanoparticleBuilder"
30#endif
31
32#ifndef CMDLINE_PARSER_VERSION
33/** @brief the program version */
34#define CMDLINE_PARSER_VERSION ""
35#endif
36
37/** @brief Where the command line options are stored */
39{
40 const char *help_help; /**< @brief Print help and exit help description. */
41 const char *version_help; /**< @brief Print version and exit help description. */
42 char * output_arg; /**< @brief Output file name. */
43 char * output_orig; /**< @brief Output file name original value given at command line. */
44 const char *output_help; /**< @brief Output file name help description. */
45 double latticeConstant_arg; /**< @brief Lattice spacing in Angstroms for cubic lattice.. */
46 char * latticeConstant_orig; /**< @brief Lattice spacing in Angstroms for cubic lattice. original value given at command line. */
47 const char *latticeConstant_help; /**< @brief Lattice spacing in Angstroms for cubic lattice. help description. */
48 double radius_arg; /**< @brief Nanoparticle radius in Angstroms. */
49 char * radius_orig; /**< @brief Nanoparticle radius in Angstroms original value given at command line. */
50 const char *radius_help; /**< @brief Nanoparticle radius in Angstroms help description. */
51 double* shellRadius_arg; /**< @brief Radius containing within it only molecules of a specific component. Specified for each component > 1 in the template file.. */
52 char ** shellRadius_orig; /**< @brief Radius containing within it only molecules of a specific component. Specified for each component > 1 in the template file. original value given at command line. */
53 unsigned int shellRadius_min; /**< @brief Radius containing within it only molecules of a specific component. Specified for each component > 1 in the template file.'s minimum occurreces */
54 unsigned int shellRadius_max; /**< @brief Radius containing within it only molecules of a specific component. Specified for each component > 1 in the template file.'s maximum occurreces */
55 const char *shellRadius_help; /**< @brief Radius containing within it only molecules of a specific component. Specified for each component > 1 in the template file. help description. */
56 double* molFraction_arg; /**< @brief Builds a multi-component random alloy nanoparticle. A mole Fraction must be specified for each component > 1 in the template file.. */
57 char ** molFraction_orig; /**< @brief Builds a multi-component random alloy nanoparticle. A mole Fraction must be specified for each component > 1 in the template file. original value given at command line. */
58 unsigned int molFraction_min; /**< @brief Builds a multi-component random alloy nanoparticle. A mole Fraction must be specified for each component > 1 in the template file.'s minimum occurreces */
59 unsigned int molFraction_max; /**< @brief Builds a multi-component random alloy nanoparticle. A mole Fraction must be specified for each component > 1 in the template file.'s maximum occurreces */
60 const char *molFraction_help; /**< @brief Builds a multi-component random alloy nanoparticle. A mole Fraction must be specified for each component > 1 in the template file. help description. */
61 double vacancyPercent_arg; /**< @brief Percentage of atoms to remove from within vacancy range. */
62 char * vacancyPercent_orig; /**< @brief Percentage of atoms to remove from within vacancy range original value given at command line. */
63 const char *vacancyPercent_help; /**< @brief Percentage of atoms to remove from within vacancy range help description. */
64 double vacancyInnerRadius_arg; /**< @brief Radius arround core-shell where vacancies should be located.. */
65 char * vacancyInnerRadius_orig; /**< @brief Radius arround core-shell where vacancies should be located. original value given at command line. */
66 const char *vacancyInnerRadius_help; /**< @brief Radius arround core-shell where vacancies should be located. help description. */
67 double vacancyOuterRadius_arg; /**< @brief Radius arround core-shell where vacancies should be located.. */
68 char * vacancyOuterRadius_orig; /**< @brief Radius arround core-shell where vacancies should be located. original value given at command line. */
69 const char *vacancyOuterRadius_help; /**< @brief Radius arround core-shell where vacancies should be located. help description. */
70
71 unsigned int help_given ; /**< @brief Whether help was given. */
72 unsigned int version_given ; /**< @brief Whether version was given. */
73 unsigned int output_given ; /**< @brief Whether output was given. */
74 unsigned int latticeConstant_given ; /**< @brief Whether latticeConstant was given. */
75 unsigned int radius_given ; /**< @brief Whether radius was given. */
76 unsigned int shellRadius_given ; /**< @brief Whether shellRadius was given. */
77 unsigned int molFraction_given ; /**< @brief Whether molFraction was given. */
78 unsigned int vacancyPercent_given ; /**< @brief Whether vacancyPercent was given. */
79 unsigned int vacancyInnerRadius_given ; /**< @brief Whether vacancyInnerRadius was given. */
80 unsigned int vacancyOuterRadius_given ; /**< @brief Whether vacancyOuterRadius was given. */
81
82 char **inputs ; /**< @brief unamed options (options without names) */
83 unsigned inputs_num ; /**< @brief unamed options number */
84} ;
85
86/** @brief The additional parameters to pass to parser functions */
88{
89 int override; /**< @brief whether to override possibly already present options (default 0) */
90 int initialize; /**< @brief whether to initialize the option structure gengetopt_args_info (default 1) */
91 int check_required; /**< @brief whether to check that all required options were provided (default 1) */
92 int check_ambiguity; /**< @brief whether to check for options already specified in the option structure gengetopt_args_info (default 0) */
93 int print_errors; /**< @brief whether getopt_long should print an error message for a bad option (default 1) */
94} ;
95
96/** @brief the purpose string of the program */
97extern const char *gengetopt_args_info_purpose;
98/** @brief the usage string of the program */
99extern const char *gengetopt_args_info_usage;
100/** @brief the description string of the program */
101extern const char *gengetopt_args_info_description;
102/** @brief all the lines making the help output */
103extern const char *gengetopt_args_info_help[];
104
105/**
106 * The command line parser
107 * @param argc the number of command line options
108 * @param argv the command line options
109 * @param args_info the structure where option information will be stored
110 * @return 0 if everything went fine, NON 0 if an error took place
111 */
112int cmdline_parser (int argc, char **argv,
113 struct gengetopt_args_info *args_info);
114
115/**
116 * The command line parser (version with additional parameters - deprecated)
117 * @param argc the number of command line options
118 * @param argv the command line options
119 * @param args_info the structure where option information will be stored
120 * @param override whether to override possibly already present options
121 * @param initialize whether to initialize the option structure my_args_info
122 * @param check_required whether to check that all required options were provided
123 * @return 0 if everything went fine, NON 0 if an error took place
124 * @deprecated use cmdline_parser_ext() instead
125 */
126int cmdline_parser2 (int argc, char **argv,
127 struct gengetopt_args_info *args_info,
128 int override, int initialize, int check_required);
129
130/**
131 * The command line parser (version with additional parameters)
132 * @param argc the number of command line options
133 * @param argv the command line options
134 * @param args_info the structure where option information will be stored
135 * @param params additional parameters for the parser
136 * @return 0 if everything went fine, NON 0 if an error took place
137 */
138int cmdline_parser_ext (int argc, char **argv,
139 struct gengetopt_args_info *args_info,
140 struct cmdline_parser_params *params);
141
142/**
143 * Save the contents of the option struct into an already open FILE stream.
144 * @param outfile the stream where to dump options
145 * @param args_info the option struct to dump
146 * @return 0 if everything went fine, NON 0 if an error took place
147 */
148int cmdline_parser_dump(FILE *outfile,
149 struct gengetopt_args_info *args_info);
150
151/**
152 * Save the contents of the option struct into a (text) file.
153 * This file can be read by the config file parser (if generated by gengetopt)
154 * @param filename the file where to save
155 * @param args_info the option struct to save
156 * @return 0 if everything went fine, NON 0 if an error took place
157 */
158int cmdline_parser_file_save(const char *filename,
159 struct gengetopt_args_info *args_info);
160
161/**
162 * Print the help
163 */
165/**
166 * Print the version
167 */
169
170/**
171 * Initializes all the fields a cmdline_parser_params structure
172 * to their default values
173 * @param params the structure to initialize
174 */
176
177/**
178 * Allocates dynamically a cmdline_parser_params structure and initializes
179 * all its fields to their default values
180 * @return the created and initialized cmdline_parser_params structure
181 */
183
184/**
185 * Initializes the passed gengetopt_args_info structure's fields
186 * (also set default values for options that have a default)
187 * @param args_info the structure to initialize
188 */
189void cmdline_parser_init (struct gengetopt_args_info *args_info);
190/**
191 * Deallocates the string fields of the gengetopt_args_info structure
192 * (but does not deallocate the structure itself)
193 * @param args_info the structure to deallocate
194 */
195void cmdline_parser_free (struct gengetopt_args_info *args_info);
196
197/**
198 * The config file parser (deprecated version)
199 * @param filename the name of the config file
200 * @param args_info the structure where option information will be stored
201 * @param override whether to override possibly already present options
202 * @param initialize whether to initialize the option structure my_args_info
203 * @param check_required whether to check that all required options were provided
204 * @return 0 if everything went fine, NON 0 if an error took place
205 * @deprecated use cmdline_parser_config_file() instead
206 */
207int cmdline_parser_configfile (const char *filename,
208 struct gengetopt_args_info *args_info,
209 int override, int initialize, int check_required);
210
211/**
212 * The config file parser
213 * @param filename the name of the config file
214 * @param args_info the structure where option information will be stored
215 * @param params additional parameters for the parser
216 * @return 0 if everything went fine, NON 0 if an error took place
217 */
218int cmdline_parser_config_file (const char *filename,
219 struct gengetopt_args_info *args_info,
220 struct cmdline_parser_params *params);
221
222/**
223 * Checks that all the required options were specified
224 * @param args_info the structure to check
225 * @param prog_name the name of the program that will be used to print
226 * possible errors
227 * @return
228 */
229int cmdline_parser_required (struct gengetopt_args_info *args_info,
230 const char *prog_name);
231
232
233#ifdef __cplusplus
234}
235#endif /* __cplusplus */
236#endif /* NANOPARTICLEBUILDERCMD_H */
int cmdline_parser_dump(FILE *outfile, struct gengetopt_args_info *args_info)
Save the contents of the option struct into an already open FILE stream.
int cmdline_parser(int argc, char **argv, struct gengetopt_args_info *args_info)
The command line parser.
int cmdline_parser_file_save(const char *filename, struct gengetopt_args_info *args_info)
Save the contents of the option struct into a (text) file.
const char * gengetopt_args_info_purpose
the purpose string of the program
const char * gengetopt_args_info_help[]
all the lines making the help output
int cmdline_parser2(int argc, char **argv, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
The command line parser (version with additional parameters - deprecated)
int cmdline_parser_required(struct gengetopt_args_info *args_info, const char *prog_name)
Checks that all the required options were specified.
void cmdline_parser_print_version(void)
Print the version.
struct cmdline_parser_params * cmdline_parser_params_create(void)
Allocates dynamically a cmdline_parser_params structure and initializes all its fields to their defau...
const char * gengetopt_args_info_usage
the usage string of the program
int cmdline_parser_ext(int argc, char **argv, struct gengetopt_args_info *args_info, struct cmdline_parser_params *params)
The command line parser (version with additional parameters)
void cmdline_parser_init(struct gengetopt_args_info *args_info)
Initializes the passed gengetopt_args_info structure's fields (also set default values for options th...
const char * gengetopt_args_info_description
the description string of the program
void cmdline_parser_print_help(void)
Print the help.
int cmdline_parser_config_file(const char *filename, struct gengetopt_args_info *args_info, struct cmdline_parser_params *params)
The config file parser.
void cmdline_parser_free(struct gengetopt_args_info *args_info)
Deallocates the string fields of the gengetopt_args_info structure (but does not deallocate the struc...
void cmdline_parser_params_init(struct cmdline_parser_params *params)
Initializes all the fields a cmdline_parser_params structure to their default values.
int cmdline_parser_configfile(const char *filename, struct gengetopt_args_info *args_info, int override, int initialize, int check_required)
The config file parser (deprecated version)
The additional parameters to pass to parser functions.
int print_errors
whether getopt_long should print an error message for a bad option (default 1)
int check_required
whether to check that all required options were provided (default 1)
int check_ambiguity
whether to check for options already specified in the option structure gengetopt_args_info (default 0...
int initialize
whether to initialize the option structure gengetopt_args_info (default 1)
Where the command line options are stored.
unsigned int vacancyInnerRadius_given
Whether vacancyInnerRadius was given.
unsigned int output_given
Whether output was given.
char ** molFraction_orig
Builds a multi-component random alloy nanoparticle.
unsigned int latticeConstant_given
Whether latticeConstant was given.
double vacancyPercent_arg
Percentage of atoms to remove from within vacancy range.
const char * radius_help
Nanoparticle radius in Angstroms help description.
char * output_orig
output file name original value given at command line.
const char * output_help
output file name help description.
double vacancyOuterRadius_arg
Radius arround core-shell where vacancies should be located.
const char * molFraction_help
Builds a multi-component random alloy nanoparticle.
unsigned inputs_num
unamed options number
char * vacancyInnerRadius_orig
Radius arround core-shell where vacancies should be located.
const char * vacancyInnerRadius_help
Radius arround core-shell where vacancies should be located.
const char * latticeConstant_help
Lattice spacing in Angstroms for cubic lattice.
unsigned int molFraction_given
Whether molFraction was given.
const char * vacancyPercent_help
Percentage of atoms to remove from within vacancy range help description.
const char * help_help
Print help and exit help description.
double * molFraction_arg
Builds a multi-component random alloy nanoparticle.
char * vacancyPercent_orig
Percentage of atoms to remove from within vacancy range original value given at command line.
char * output_arg
output file name.
char ** inputs
unamed options (options without names)
double * shellRadius_arg
Radius containing within it only molecules of a specific component.
unsigned int molFraction_min
Builds a multi-component random alloy nanoparticle.
unsigned int shellRadius_given
Whether shellRadius was given.
const char * vacancyOuterRadius_help
Radius arround core-shell where vacancies should be located.
char * latticeConstant_orig
Lattice spacing in Angstroms for cubic lattice.
unsigned int molFraction_max
Builds a multi-component random alloy nanoparticle.
double radius_arg
Nanoparticle radius in Angstroms.
unsigned int help_given
Whether help was given.
const char * shellRadius_help
Radius containing within it only molecules of a specific component.
char * vacancyOuterRadius_orig
Radius arround core-shell where vacancies should be located.
unsigned int radius_given
Whether radius was given.
double vacancyInnerRadius_arg
Radius arround core-shell where vacancies should be located.
char * radius_orig
Nanoparticle radius in Angstroms original value given at command line.
unsigned int version_given
Whether version was given.
unsigned int shellRadius_min
Radius containing within it only molecules of a specific component.
const char * version_help
Print version and exit help description.
unsigned int vacancyPercent_given
Whether vacancyPercent was given.
double latticeConstant_arg
Lattice spacing in Angstroms for cubic lattice.
char ** shellRadius_orig
Radius containing within it only molecules of a specific component.
unsigned int shellRadius_max
Radius containing within it only molecules of a specific component.
unsigned int vacancyOuterRadius_given
Whether vacancyOuterRadius was given.