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Revision 3389 - Directory Listing - [select for diffs]
Modified Tue Apr 29 17:50:49 2008 UTC (16 years, 1 month ago) by gezelter
Diff to previous 1439 
Changes about metals
Revision 1439 - Directory Listing - [select for diffs]
Modified Thu Jul 29 20:06:07 2004 UTC (19 years, 10 months ago) by gezelter
Diff to previous 1434 
Post-submission clean-up
Revision 1434 - Directory Listing - [select for diffs]
Modified Thu Jul 29 18:01:05 2004 UTC (19 years, 10 months ago) by chrisfen
Diff to previous 1433 
Added Water.frc discussion, improved the integrator section, added references
Revision 1433 - Directory Listing - [select for diffs]
Modified Thu Jul 29 14:11:47 2004 UTC (19 years, 10 months ago) by chrisfen
Diff to previous 1428 
Added two new figures
Revision 1428 - Directory Listing - [select for diffs]
Modified Wed Jul 28 19:46:08 2004 UTC (19 years, 10 months ago) by gezelter
Diff to previous 1425 
new updates
Revision 1425 - Directory Listing - [select for diffs]
Modified Wed Jul 28 15:44:21 2004 UTC (19 years, 10 months ago) by gezelter
Diff to previous 1179 
edits done
Revision 1179 - Directory Listing - [select for diffs]
Modified Fri May 14 15:50:27 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1177 
more revisions
Revision 1177 - Directory Listing - [select for diffs]
Modified Thu May 13 15:00:59 2004 UTC (20 years, 1 month ago) by tim
Diff to previous 1168 
add some keywords
Revision 1168 - Directory Listing - [select for diffs]
Modified Wed May 12 19:32:47 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1155 
added more revisions to the paper
Revision 1155 - Directory Listing - [select for diffs]
Modified Tue May 11 19:36:28 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1149 
starting to rearrange the prose after the intro.
Revision 1149 - Directory Listing - [select for diffs]
Modified Thu May 6 19:15:52 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1148 
added more tables.
Revision 1148 - Directory Listing - [select for diffs]
Modified Thu May 6 16:54:50 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1147 
added more tables
Revision 1147 - Directory Listing - [select for diffs]
Modified Wed May 5 17:42:55 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1146 
added in all of the general global keywords. Still need to add the zConstraint and minimizer keywords.
Revision 1146 - Directory Listing - [select for diffs]
Modified Tue May 4 19:41:47 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1145 
adding to the table
Revision 1145 - Directory Listing - [select for diffs]
Modified Tue May 4 16:59:14 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1134 
adding a separate file to work on the bass keywords.
Revision 1134 - Directory Listing - [select for diffs]
Modified Mon Apr 26 21:05:03 2004 UTC (20 years, 1 month ago) by mmeineke
Diff to previous 1123 
finished removing the trajectory analysis.

took out the rattle derivation.

added a section concerning the creation of init files.

currently working on a table of key words for the package.
Revision 1123 - Directory Listing - [select for diffs]
Modified Mon Apr 19 21:25:23 2004 UTC (20 years, 2 months ago) by mmeineke
Diff to previous 1122 
 fixed the makefile, and fixed some visuals on the schemes
Revision 1122 - Directory Listing - [select for diffs]
Modified Mon Apr 19 21:07:53 2004 UTC (20 years, 2 months ago) by mmeineke
Diff to previous 1121 
finished cleaning up the old tex files
Revision 1121 - Directory Listing - [select for diffs]
Modified Mon Apr 19 21:00:24 2004 UTC (20 years, 2 months ago) by mmeineke
Diff to previous 1082 
Just copied over the changes from the dissertation.
Also converted the figures to pdf.
All revisions now take place on the oopsePaper.tex file
Revision 1082 - Directory Listing - [select for diffs]
Modified Wed Mar 3 23:16:18 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 1081 
NPTf complete, NPTxyz complete
Revision 1081 - Directory Listing - [select for diffs]
Modified Wed Mar 3 20:50:51 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 1079 
NPTi complete
Revision 1079 - Directory Listing - [select for diffs]
Modified Tue Mar 2 22:15:53 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 1077 
NPT work in progress
Revision 1077 - Directory Listing - [select for diffs]
Modified Tue Mar 2 03:15:35 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 1076 
More DLM changes
Revision 1076 - Directory Listing - [select for diffs]
Modified Mon Mar 1 22:29:28 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 1069 
more changes for integrators
Revision 1069 - Directory Listing - [select for diffs]
Modified Thu Feb 26 15:28:57 2004 UTC (20 years, 3 months ago) by gezelter
Diff to previous 973 
Work on integrators
Revision 973 - Directory Listing - [select for diffs]
Modified Wed Jan 21 19:00:23 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 972 
minor corrections to the previous commit
Revision 972 - Directory Listing - [select for diffs]
Modified Wed Jan 21 18:40:38 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 968 
added changes into the Empirical Energy section
Revision 968 - Directory Listing - [select for diffs]
Modified Tue Jan 20 16:49:22 2004 UTC (20 years, 5 months ago) by tim
Diff to previous 967 
*** empty log message ***
Revision 967 - Directory Listing - [select for diffs]
Modified Tue Jan 20 14:17:21 2004 UTC (20 years, 5 months ago) by chrisfen
Diff to previous 966 
Corrected .bib file entries
Revision 966 - Directory Listing - [select for diffs]
Modified Mon Jan 19 21:44:47 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 964 
ran spell check, and fixed some little typos
Revision 964 - Directory Listing - [select for diffs]
Modified Mon Jan 19 21:03:47 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 961 
worked listing schemes into the document
Revision 961 - Directory Listing - [select for diffs]
Modified Mon Jan 19 17:24:52 2004 UTC (20 years, 5 months ago) by chrisfen
Diff to previous 937 
Adjusted the SSD part of the paper...
Revision 937 - Directory Listing - [select for diffs]
Modified Tue Jan 13 20:46:01 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 935 
fixed some things in the periodic image part
Revision 935 - Directory Listing - [select for diffs]
Modified Tue Jan 13 20:10:23 2004 UTC (20 years, 5 months ago) by chrisfen
Diff to previous 933 
Made changes to the rigid body stuff...
Revision 933 - Directory Listing - [select for diffs]
Modified Tue Jan 13 20:03:21 2004 UTC (20 years, 5 months ago) by chuckv
Diff to previous 932 
more changes to eam section.
Revision 932 - Directory Listing - [select for diffs]
Modified Tue Jan 13 20:01:19 2004 UTC (20 years, 5 months ago) by chuckv
Diff to previous 931 
More typo fixes.
Revision 931 - Directory Listing - [select for diffs]
Modified Tue Jan 13 19:45:56 2004 UTC (20 years, 5 months ago) by chuckv
Diff to previous 930 
Changed section on eam.
Revision 930 - Directory Listing - [select for diffs]
Modified Tue Jan 13 19:24:07 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 928 
added new revisions
Revision 928 - Directory Listing - [select for diffs]
Modified Tue Jan 13 15:24:22 2004 UTC (20 years, 5 months ago) by tim
Diff to previous 925 
revision
Revision 925 - Directory Listing - [select for diffs]
Modified Mon Jan 12 18:43:56 2004 UTC (20 years, 5 months ago) by chrisfen
Diff to previous 918 
Updated the rigid body and ssd sections
Revision 918 - Directory Listing - [select for diffs]
Modified Fri Jan 9 20:57:55 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 917 
rotated the lipid figure

added eam to the Emperical Energy
Revision 917 - Directory Listing - [select for diffs]
Modified Fri Jan 9 20:50:37 2004 UTC (20 years, 5 months ago) by chuckv
Diff to previous 915 
Added daw entry.
Revision 915 - Directory Listing - [select for diffs]
Modified Fri Jan 9 20:25:50 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 908 
added a lennard jones section to the Emperical Energy section
Revision 908 - Directory Listing - [select for diffs]
Modified Thu Jan 8 17:55:53 2004 UTC (20 years, 5 months ago) by chrisfen
Diff to previous 904 
Added rigid body discussion and added to .bib file...
Revision 904 - Directory Listing - [select for diffs]
Modified Wed Jan 7 15:21:00 2004 UTC (20 years, 5 months ago) by tim
Diff to previous 903 
*** empty log message ***
Revision 903 - Directory Listing - [select for diffs]
Modified Wed Jan 7 03:53:53 2004 UTC (20 years, 5 months ago) by tim
Diff to previous 902 
Periodic Boundary Conditions
Revision 902 - Directory Listing - [select for diffs]
Modified Tue Jan 6 21:19:39 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 899 
started adding some changes from before break
Revision 899 - Directory Listing - [select for diffs]
Modified Tue Jan 6 18:53:58 2004 UTC (20 years, 5 months ago) by mmeineke
Diff to previous 820 
reworked the directory structure to reflect the Outline of the paper. All major sections now have their
own tex file
Revision 820 - Directory Listing - [select for diffs]
Modified Fri Oct 24 22:01:24 2003 UTC (20 years, 7 months ago) by gezelter
Diff to previous 819 
Started work on integrator stuff
Revision 819 - Directory Listing - [select for diffs]
Modified Fri Oct 24 21:28:19 2003 UTC (20 years, 7 months ago) by gezelter
Diff to previous 818 
New File
Revision 818 - Directory Listing - [select for diffs]
Modified Fri Oct 24 21:27:59 2003 UTC (20 years, 7 months ago) by gezelter
Diff to previous 806 
Formatting changes to get out of RevTex nonsense
Revision 806 - Directory Listing - [select for diffs]
Modified Fri Oct 17 05:07:49 2003 UTC (20 years, 8 months ago) by mmeineke
Diff to previous 805 
dded my handwritten pages from 10-16-03
Revision 805 - Directory Listing - [select for diffs]
Modified Thu Oct 16 21:02:41 2003 UTC (20 years, 8 months ago) by mmeineke
Diff to previous 779 
changed format to preprint article
Revision 779 - Directory Listing - [select for diffs]
Modified Sun Sep 21 05:09:16 2003 UTC (20 years, 9 months ago) by tim
Diff to previous 776 
Added zcons.tex
Revision 776 - Directory Listing - [select for diffs]
Modified Fri Sep 19 19:23:17 2003 UTC (20 years, 9 months ago) by chrisfen
Diff to previous 775 
Just added to the make file...
Revision 775 - Directory Listing - [select for diffs]
Modified Fri Sep 19 19:16:36 2003 UTC (20 years, 9 months ago) by chrisfen
Diff to previous 765 
Added the integrator.tex file with figure. This is the same as the ssdePaper, so it needs to be adjusted for the OOPSE paper. Also updated the oopse.bib file.
Revision 765 - Directory Listing - [select for diffs]
Modified Tue Sep 16 17:06:02 2003 UTC (20 years, 9 months ago) by chrisfen
Diff to previous 752 
SSD portion of paper added (ssd.tex).
Revision 752 - Directory Listing - [select for diffs]
Modified Mon Sep 8 20:58:12 2003 UTC (20 years, 9 months ago) by chuckv
Diff to previous 751 
*** empty log message ***
Revision 751 - Directory Listing - [select for diffs]
Modified Mon Sep 8 16:52:01 2003 UTC (20 years, 9 months ago) by chuckv
Diff to previous 740 
Added parallel section of paper.
Revision 740 - Directory Listing - [select for diffs]
Modified Tue Sep 2 18:40:47 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 737 
added a charmm citation to the bib file.

finished adding all of the equations into DUFF.
Revision 737 - Directory Listing - [select for diffs]
Modified Mon Sep 1 19:50:07 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 717 
added some text to DUFF, changed the preamble from two column to preprint format.
Revision 717 - Directory Listing - [select for diffs]
Modified Mon Aug 25 20:25:12 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 716 
did some more work on DUFF.
Revision 716 - Directory Listing - [select for diffs]
Modified Sun Aug 24 04:00:44 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 715 
added the lipid figure, and did some work on DUFF.
Revision 715 - Directory Listing - [select for diffs]
Modified Sun Aug 24 02:44:05 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 714 
little changes to finish the port from make current to currMake
Revision 714 - Directory Listing - [select for diffs]
Modified Sun Aug 24 02:36:10 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 713 
overhauled the makefile to build oopse.tex from the infiles rather than mess with includes.
Also renamed header and footer to preamble and bibEnd respectively.
make current has been replaced with currMake to tke a look at a single tex section.
Revision 713 - Directory Listing - [select for diffs]
Modified Sat Aug 23 17:01:50 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 712 
added some work to DUFF
Revision 712 - Directory Listing - [select for diffs]
Modified Sat Aug 23 12:07:27 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 710 
added a currMake script to replace the make current
Revision 710 - Directory Listing - [select for diffs]
Modified Fri Aug 22 19:37:54 2003 UTC (20 years, 9 months ago) by mmeineke
Diff to previous 709 
played a little with the headers in DUFF
Revision 709 - Directory Listing - [select for diffs]
Modified Thu Aug 21 21:17:52 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 698 
made some changes.
Revision 698 - Directory Listing - [select for diffs]
Modified Fri Aug 15 16:01:21 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 697 
started working on DUFF
Revision 697 - Directory Listing - [select for diffs]
Modified Thu Aug 14 17:24:38 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 695 
finished a rough draft of the dynamicProps section. added calculation sheme to the staticProps
Revision 695 - Directory Listing - [select for diffs]
Modified Wed Aug 13 21:22:44 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 691 
added text to the analysis code.
Revision 691 - Directory Listing - [select for diffs]
Modified Wed Aug 13 14:49:07 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 668 
trying to debug eqn references
Revision 668 - Directory Listing - [select for diffs]
Modified Wed Aug 6 18:35:50 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 666 
added the main equations to the analysis section
Revision 666 - Directory Listing - [select for diffs]
Modified Tue Aug 5 21:38:16 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 664 
edited the header to be a revtex style two column layout.
Revision 664 - Directory Listing - [select for diffs]
Modified Mon Aug 4 21:52:29 2003 UTC (20 years, 10 months ago) by mmeineke
Diff to previous 663 
added a current.tex to allow for looking at your current work, just change the include to the current tex file

also seperated all header info into header.tex so that oopse.tex and current.tex will behave the same.
Revision 663 - Directory Listing - [select for diffs]
Added Fri Aug 1 20:22:36 2003 UTC (20 years, 10 months ago) by mmeineke 
This commit was generated by cvs2svn to compensate for changes in r662,
which included commits to RCS files with non-trunk default branches.

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