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Revision: 1019
Committed: Wed Feb 4 20:19:21 2004 UTC (20 years, 4 months ago) by chrisfen
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Further improvements. Discussion of the results in the table was added.

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# User Rev Content
1 chrisfen 743 @string{jcp = "J. Chem. Phys."}
2     @string{cpl = "Chem. Phys. Lett."}
3     @string{jpc = "J. Phys. Chem."}
4     @string{jpcA = "J. Phys. Chem. A"}
5     @string{jpcB = "J. Phys. Chem. B"}
6     @string{cp = "Chem. Phys."}
7     @string{acp = "Adv. Chem. Phys."}
8     @string{pra = "Phys. Rev. A"}
9     @string{prb = "Phys. Rev. B"}
10     @string{pre = "Phys. Rev. E"}
11     @string{prl = "Phys. Rev. Lett."}
12     @string{rmp = "Rev. Mod. Phys."}
13     @string{jml = "J. Mol. Liq."}
14     @string{mp = "Mol. Phys."}
15     @string{pnas = "Proc. Natl. Acad. Sci. USA"}
16     @string{jacs = "J. Am. Chem. Soc."}
17     @string{jcc = "J. Comput. Chem."}
18 chrisfen 1017 @string{pccp = "Phys. Chem. Chem. Phys."}
19 chrisfen 743
20     @Book{Berne90,
21     author = {B.~J. Berne and R. Pecora},
22     title = {Dynamic Light Scattering},
23     publisher = {Robert E. Krieger Publishing Company, Inc.},
24     year = 1990,
25     address = {Malabar, Florida}
26     }
27    
28     @Article{Evans77,
29     author = {D.~J. Evans},
30     title = {On the representation of orientation space},
31     journal = {Mol. Phys.},
32     year = 1977,
33     volume = 34,
34     pages = {317-325}
35     }
36    
37     @Article{Tuckerman92,
38     author = {M. Tuckerman and B.~J. Berne and G.~J. Martyna},
39     title = {Reversible multiple time scale molecular dynamics},
40     journal = jcp,
41     year = 1992,
42     volume = 97,
43     pages = {1990-2001}
44     }
45    
46     @Book{Hansen86,
47     author = {J.~P. Hansen and I.~R. McDonald},
48     title = {Theory of Simple Liquids},
49     chapter = 7,
50     publisher = {Academic Press},
51     year = 1986,
52     address = {London},
53     pages = {199-206}
54     }
55    
56     @Article{Angelani98,
57     author = {L. Angelani and G. Parisi and G. Ruocco and G. Viliani},
58     title = {Connected Network of Minima as a Model Glass: Long
59     Time Dynamics},
60     journal = prl,
61     year = 1998,
62     volume = 81,
63     number = 21,
64     pages = {4648-4651}
65     }
66    
67     @Article{Stillinger82,
68     author = {F.~H. Stillinger and T.~A. Weber},
69     title = {Hidden structure in liquids},
70     journal = pra,
71     year = 1982,
72     volume = 25,
73     number = 2,
74     pages = {978-989}
75     }
76    
77     @Article{Stillinger83,
78     author = {F.~H. Stillinger and T.~A. Weber},
79     title = {Dynamics of structural transitions in liquids},
80     journal = pra,
81     year = 1983,
82     volume = 28,
83     number = 4,
84     pages = {2408-2416}
85     }
86    
87     @Article{Weber84,
88     author = {T.~A. Weber and F.~H. Stillinger},
89     title = {The effect of density on the inherent structure in
90     liquids},
91     journal = jcp,
92     year = 1984,
93     volume = 80,
94     number = 6,
95     pages = {2742-2746}
96     }
97    
98     @Article{Stillinger85,
99     author = {F.~H. Stillinger and T.~A. Weber},
100     title = {Inherent structure theory of liquids in the
101     hard-sphere limit},
102     journal = jcp,
103     year = 1985,
104     volume = 83,
105     number = 9,
106     pages = {4767-4775}
107     }
108    
109     @Article{Stillinger98,
110     author = {S. Sastry and P.~G. Debenedetti and F.~H. Stillinger},
111     title = {Signatures of distinct dynamical regimes in the
112     energy landscape of a glass-forming liquid},
113     journal = {Nature},
114     year = 1998,
115     volume = 393,
116     pages = {554-557}
117     }
118    
119    
120     @Article{Parkhurst75a,
121     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
122     title = {Dense liquids. I. The effect of density and
123     temperature on viscosity of tetramethylsilane and
124     benzene-$\mbox{D}_6$},
125     journal = jcp,
126     year = 1975,
127     volume = 63,
128     number = 6,
129     pages = {2698-2704}
130     }
131    
132     @Article{Parkhurst75b,
133     author = {H.~J. {Parkhurst, Jr.} and J. Jonas},
134     title = {Dense liquids. II. The effect of density and
135     temperature on viscosity of tetramethylsilane and
136     benzene },
137     journal = jcp,
138     year = 1975,
139     volume = 63,
140     number = 6,
141     pages = {2705-2709}
142     }
143    
144     @Article{Forester97,
145     author = {T.~R. Forester and W. Smith and J.~H.~R. Clarke},
146     title = {Antibiotic activity of valinomycin - Molecular
147     dynamics simulations involving the water/membrane
148     interface},
149     journal = {J. Chem. Soc. - Faraday Transactions},
150     year = 1997,
151     volume = 93,
152     pages = {613-619}
153     }
154    
155     @Article{Tieleman98,
156     author = {D.~P. Tieleman and H.~J.~C. Berendsen},
157     title = {A molecular dynamics study of the pores formed by
158     Escherichia coli OmpF porin in a fully hydrated
159     palmitoyloleoylphosphatidylcholine bilayer},
160     journal = {Biophys. J.},
161     year = 1998,
162     volume = 74,
163     pages = {2786-2801}
164     }
165    
166     @Article{Cascales98,
167     author = {J.~J.~L. Cascales and J.~G.~H. Cifre and J.~G. de~la~Torre},
168     title = {Anaesthetic mechanism on a model biological
169     membrane: A molecular dynamics simulation study},
170     journal = {J. Phys. Chem. B},
171     year = 1998,
172     volume = 102,
173     pages = {625-631}
174     }
175    
176     @Article{Bassolino95,
177     author = {D. Bassolino and H.~E. Alper and T.~R. Stouch},
178     title = {MECHANISM OF SOLUTE DIFFUSION THROUGH LIPID
179     BILAYER-MEMBRANES BY MOLECULAR-DYNAMICS SIMULATION},
180     journal = {J. Am. Chem. Soc.},
181     year = 1995,
182     volume = 117,
183     pages = {4118-4129}
184     }
185    
186     @Article{Alper95,
187     author = {H.~E. Alper and T.~R. Stouch},
188     title = {ORIENTATION AND DIFFUSION OF A DRUG ANALOG IN
189     BIOMEMBRANES - MOLECULAR-DYNAMICS SIMULATIONS},
190     journal = {J. Phys. Chem.},
191     year = 1995,
192     volume = 99,
193     pages = {5724-5731}
194     }
195    
196     @Article{Sok92,
197     author = {R.~M. Sok and H.~J.~C. Berendsen and W.~F. van~Gunsteren},
198     title = {MOLECULAR-DYNAMICS SIMULATION OF THE TRANSPORT OF
199     SMALL MOLECULES ACROSS A POLYMER MEMBRANE},
200     journal = {J. Chem. Phys.},
201     year = 1992,
202     volume = 96,
203     pages = {4699-4704}
204     }
205    
206     @Article{Rabani99,
207     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
208     title = {Direct Observation of Stretched-Exponential
209     Relaxation in Low-Temperature Lennard-Jones Systems
210     Using the Cage Correlation Function},
211     journal = prl,
212     year = {1999},
213     volume = 82,
214     pages = {3649}
215     }
216    
217     @Article{Rabani97,
218     author = {E. Rabani and J.~D. Gezelter and B.~J. Berne},
219     title = {Calculating the hopping rate for self-diffusion on
220     rough potential energy surfaces: Cage correlations},
221     journal = {J. Chem. Phys.},
222     year = 1997,
223     volume = 107,
224     pages = {6867-6876}
225     }
226    
227     @Article{Gezelter99,
228     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
229     title = {Methods for calculating the hopping rate for
230     orientational and spatial diffusion in a molecular
231     liquid: $\mbox{CS}_{2}$},
232     journal = jcp,
233     year = 1999,
234     volume = 110,
235     pages = 3444
236     }
237    
238     @Article{Gezelter98a,
239     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
240     title = {Response to 'Comment on a Critique of the
241     Instantaneous Normal Mode (INM) Approach to
242     Diffusion'},
243     journal = jcp,
244     year = 1998,
245     volume = 109,
246     pages = 4695
247     }
248    
249     @Article{Gezelter97,
250     author = {J.~D. Gezelter and E. Rabani and B.~J. Berne},
251     title = {Can imaginary instantaneous normal mode frequencies
252     predict barriers to self-diffusion?},
253     journal = jcp,
254     year = 1997,
255     volume = 107,
256     pages = 4618
257     }
258    
259     @Article{Zwanzig83,
260     author = {R. Zwanzig},
261     title = {On the relation between self-diffusion and viscosity
262     of liquids},
263     journal = jcp,
264     year = 1983,
265     volume = 79,
266     pages = {4507-4508}
267     }
268    
269     @Article{Zwanzig88,
270     author = {R. Zwanzig},
271     title = {Diffusion in rough potential},
272     journal = {Proc. Natl. Acad. Sci. USA},
273     year = 1988,
274     volume = 85,
275     pages = 2029
276     }
277    
278     @Article{Stillinger95,
279     author = {F.~H. Stillinger},
280     title = {A Topographic View of Supercooled Liquids and Glass
281     Formation},
282     journal = {Science},
283     year = 1995,
284     volume = 267,
285     pages = {1935-1939}
286     }
287    
288     @InCollection{Angell85,
289     author = {C.~A. Angell},
290     title = {unknown},
291     booktitle = {Relaxations in Complex Systems},
292     publisher = {National Technical Information Service,
293     U.S. Department of Commerce},
294     year = 1985,
295     editor = {K.~Ngai and G.~B. Wright},
296     address = {Springfield, VA},
297     pages = 1
298     }
299    
300     @Article{Bembenek96,
301     author = {S.~D. Bembenek and B.~B. Laird},
302     title = {The role of localization in glasses and supercooled liquids},
303     journal = jcp,
304     year = 1996,
305     volume = 104,
306     pages = 5199
307     }
308    
309     @Article{Sun97,
310     author = {X. Sun and W.~H. Miller},
311     title = {Semiclassical initial value representation for
312     electronically nonadiabatic molecular dynamics},
313     journal = jcp,
314     year = 1997,
315     volume = 106,
316     pages = 6346
317     }
318    
319     @Article{Spath96,
320     author = {B.~W. Spath and W.~H. Miller},
321     title = {SEMICLASSICAL CALCULATION OF CUMULATIVE REACTION
322     PROBABILITIES},
323     journal = jcp,
324     year = 1996,
325     volume = 104,
326     pages = 95
327     }
328    
329     @Book{Warshel91,
330     author = {Arieh Warshel},
331     title = {Computer modeling of chemical reactions in enzymes
332     and solutions},
333     publisher = {Wiley},
334     year = 1991,
335     address = {New York}
336     }
337    
338     @Article{Vuilleumier97,
339     author = {Rodolphe Vuilleumier and Daniel Borgis},
340     title = {Molecular Dynamics of an excess proton in water
341     using a non-additive valence bond force field},
342     journal = jpc,
343     year = 1997,
344     volume = {in press}
345     }
346    
347     @Article{Kob95a,
348     author = {W. Kob and H.~C. Andersen},
349     title = {Testing mode-coupling theory for a supercooled
350     binary Lennard-Jones mixtures: The van Hove
351     corraltion function},
352     journal = pre,
353     year = 1995,
354     volume = 51,
355     pages = {4626-4641}
356     }
357    
358     @Article{Kob95b,
359     author = {W. Kob and H.~C. Andersen},
360     title = {Testing mode-coupling theory for a supercooled
361     binary Lennard-Jones mixtures. II. Intermediate
362     scattering function and dynamic susceptibility},
363     journal = pre,
364     year = 1995,
365     volume = 52,
366     pages = {4134-4153}
367     }
368    
369     @InProceedings{Gotze89,
370     author = "W. G{\"{o}}tze",
371     title = "Aspects of Structural Glass Transitions",
372     editor = "J.~P. Hansen and D. Levesque and J. Zinn-Justin",
373     volume = "I",
374     pages = "287-503",
375     booktitle = "Liquids, Freezing and Glass Transitions",
376     year = 1989,
377     publisher = "North-Holland",
378     address = "Amsterdam"
379     }
380    
381     @Article{Sun97a,
382     author = "X. Sun and W.~H. Miller",
383     title = {Mixed semiclassical-classical approaches to the
384     dynamics of complex molecular systems},
385     journal = jcp,
386     year = 1997,
387     pages = 916
388     }
389    
390     @Article{Keshavamurthy94,
391     author = "S. Keshavamurthy and W.~H. Miller",
392     title = "ivr",
393     journal = cpl,
394     year = 1994,
395     volume = 218,
396     pages = 189
397     }
398    
399     @Article{Billing75,
400     author = "G.~D. Billing",
401     title = "ehrenfest",
402     journal = cpl,
403     year = 1975,
404     volume = 30,
405     pages = 391
406     }
407    
408     @Article{Chang90,
409     author = {Y.-T. Chang and W.~H. Miller},
410     title = {An Empirical Valence Bond Model for Constructing
411     Global Potential Energy Surfaces for Chemical
412     Reactions of Polyatomic Molecular Systems},
413     journal = jpc,
414     year = 1990,
415     volume = 94,
416     pages = {5884-5888}
417     }
418    
419     @Article{Shor94,
420     author = {P.W. Shor},
421     title = {Algorithms for quantum computation: discrete
422     logarithms and factoring},
423     journal = {Proceedings of the 35th Annual Symposium
424     on Foundations of Computer Science},
425     year = 1994,
426     pages = {124-134}
427     }
428    
429     @Article{Feynman82,
430     author = {R.~P. Feynman},
431     title = {Simulating physics with computers},
432     journal = {Int. J. Theor. Phys.},
433     year = 1982,
434     volume = 21,
435     pages = {467-488}
436     }
437    
438     @Article{Grover97,
439     author = {L.~K. Grover},
440     title = {Quantum computers can search arbitrarily large
441     databases by a single query},
442     journal = prl,
443     year = 1997,
444     volume = 79,
445     pages = {4709-4712}
446     }
447    
448     @Article{Chuang98,
449     author = {I. Chuang and N. Gershenfeld and M. Kubinec},
450     title = {Experimental Implementation of Fast Quantum Searching},
451     journal = prl,
452     year = 1998,
453     volume = 80,
454     pages = {3408-3411}
455     }
456    
457     @Article{Monroe95,
458     author = "C. Monroe and D.~M. Meekhof and B.~E. King and
459     W.~M. Itano and D.~J. Wineland",
460     title = {Demonstration of a fundamental quantum logic gate},
461     journal = prl,
462     year = 1995,
463     volume = 75,
464     pages = 4714
465     }
466    
467     @Article{Lent93,
468     author = "C.~S. Lent and P.~D. Tougaw and W.~Porod and
469     G.~H. Bernstein",
470     title = {Quantum Cellular Automata},
471     journal = {Nanotechnology},
472     year = 1993,
473     volume = 4,
474     pages = {49-57}
475     }
476    
477     @Article{Barenco95,
478     author = "A. Barenco and C.~H. Bennett and R. Cleve and
479     D.~P. DiVincenzo and N. Margolus and P. Shor and
480     T. Sleator and J.~A. Smolin and H. Weinfurter",
481     title = {elementary gates for quantum computation},
482     journal = {Phys. Rev. A},
483     year = 1995,
484     volume = 52,
485     pages = {3457-3467}
486     }
487    
488     @Article{Small97,
489     author = {T. Reinot and J.~M. Hayes and G.~J. Small},
490     title = {Electronic dephasing and electron-phonon coupling of
491     aluminum phthalocyanine tetrasulphonate in
492     hyperquenched and annealed glassy films of ethanol
493     and methanol over a broad temperature range},
494     journal = jcp,
495     year = 1997,
496     volume = 106,
497     pages = {457-466}
498     }
499    
500     @Article{Laflamme96,
501     author = {R. Laflamme and C. Miquel and J.~P. Paz and W.~H. Zurek},
502     title = {A perfect quantum error correcting code: 5 bit code
503     correcting a general 1 qubit error to encode 1 qubit
504     of information},
505     journal = prl,
506     year = 1996,
507     volume = 98,
508     pages = 77
509     }
510    
511     @Article{Shor95,
512     author = {P.~W. Shor},
513     title = {SCHEME FOR REDUCING DECOHERENCE IN QUANTUM COMPUTER MEMORY},
514     journal = {Phys. Rev. A},
515     year = 1995,
516     volume = 52,
517     pages = {2493-2496}
518     }
519    
520     @Article{Calderbank96,
521     author = {A.~R. Calderbank and P.~W. Shor},
522     title = {Good quantum error-correcting codes exist},
523     journal = {Phys. Rev. A},
524     year = 1996,
525     volume = 54,
526     pages = {1098-1105}
527     }
528    
529     @Article{Steane96,
530     author = {A.~M. Steane},
531     title = {Error correcting codes in quantum theory},
532     journal = prl,
533     year = 1996,
534     volume = 77,
535     pages = {793-797}
536     }
537    
538     @Article{Gezelter95,
539     author = {J.~D. Gezelter and W.~H. Miller},
540     title = {RESONANT FEATURES IN THE ENERGY-DEPENDENCE OF THE
541     RATE OF KETENE ISOMERIZATION},
542     journal = jcp,
543     year = 1995,
544     volume = 103,
545     pages = {7868-7876}
546     }
547    
548     @Article{Chakrabarti92,
549     author = {A.~C. Chakrabarti and D.~W. Deamer},
550     title = {PERMEABILITY OF LIPID BILAYERS TO AMINO-ACIDS AND PHOSPHATE},
551     journal = {Biochimica et Biophysica Acta},
552     year = 1992,
553     volume = 1111,
554     pages = {171-177}
555     }
556    
557     @Article{Paula96,
558     author = {S. Paula and A.~G. Volkov and A.~N. VanHoek and
559     T.~H. Haines and D.~W. Deamer},
560     title = {Permeation of protons, potassium ions, and small
561     polar molecules through phospholipid bilayers as a
562     function of membrane thickness},
563     journal = {Biophys. J.},
564     year = 1996,
565     volume = 70,
566     pages = {339-348}
567     }
568    
569     @Article{Little96,
570     author = {H.~J. Little},
571     title = {How has molecular pharmacology contributed to our
572     understanding of the mechanism(s) of general
573     anesthesia?},
574     journal = {Pharmacology \& Therapeutics},
575     year = 1996,
576     volume = 69,
577     pages = {37-58}
578     }
579    
580     @Article{McKinnon92,
581     author = {S.~J. McKinnon and S.~L. Whittenburg and B. Brooks},
582     title = {Nonequilibrium Molecular Dynamics Simulation of
583     Oxygen Diffusion through Hexadecane Monolayers with
584     Varying Concentrations of Cholesterol},
585     journal = jpc,
586     year = 1992,
587     volume = 96,
588     pages = {10497-10506}
589     }
590    
591     @Article{Venable93,
592     author = {R.~M. Venable and Y. Zhang and B.~J. Hardy and
593     R.~W. Pastor},
594     title = {Molecular Dynamics Simulations of a Lipid Bilayer
595     and of Hexadecane: An Investigation of Membrane Fluidity},
596     journal = {Science},
597     year = 1993,
598     volume = 262,
599     pages = {223-226}
600     }
601    
602     @Article{Essmann99,
603     author = {U. Essmann and M.~L. Berkowitz},
604     title = {Dynamical properties of phospholipid bilayers from
605     computer simulation},
606     journal = {Biophys. J.},
607     year = 1999,
608     volume = 76,
609     pages = {2081-2089}
610     }
611    
612     @Article{Tu98,
613     author = {K.~C. Tu and M. Tarek and M.~L. Klein and D. Scharf},
614     title = {Effects of anesthetics on the structure of a
615     phospholipid bilayer: Molecular dynamics
616     investigation of halothane in the hydrated liquid
617     crystal phase of dipalmitoylphosphatidylcholine},
618     journal = {Biophys. J.},
619     year = 1998,
620     volume = 75,
621     pages = {2123-2134}
622     }
623    
624     @Article{Pomes96,
625     author = {R. Pomes and B. Roux},
626     title = {Structure and dynamics of a proton wire: A
627     theoretical study of H+ translocation along the
628     single-file water chain in the gramicidin a channel},
629     journal = {Biophys. J.},
630     year = 1996,
631     volume = 71,
632     pages = {19-39}
633     }
634    
635     @Article{Duwez60,
636     author = {P. Duwez and R.~H. Willens and W. {Klement~Jr.}},
637     title = {Continuous Series of Metastable Solid Solutions in
638     Silver-Copper Alloys},
639     journal = {J. Appl. Phys.},
640     year = 1960,
641     volume = 31,
642     pages = {1136-1137}
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644    
645     @Article{Peker93,
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1903 chrisfen 1018 address = {Oxford},
1904 chrisfen 1017 }
1905    
1906     @Article{Holz00,
1907     author = {M. Holz and S.~R. Heil and A. Sacco},
1908     title = {Temperature-dependent self-diffusion coefficients of
1909     water and six selected molecular liquids for calibration
1910     in accurate $^1$H NMR PFG measurements},
1911     journal = pccp,
1912     year = 2000,
1913     volume = 2,
1914 chrisfen 1018 pages = {4740-4742},
1915 chrisfen 1017 }
1916 chrisfen 1019
1917     @Article{Barker73,
1918     author = {J.~A. Barker and R.~O. Watts},
1919     title = {Monte Carlo studies of the dielectric properties of
1920     water-like models},
1921     journal = {mp},
1922     year = 1973,
1923     volume = 26,
1924     pages = {789-792}
1925     }