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OpenMD 3.1
Molecular Dynamics in the Open
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Inheritance diagram for OpenMD::DensityField:Public Member Functions | |
| DensityField (SimInfo *info, const std::string &filename, const std::string &sele1, RealType voxelSize) | |
| virtual RealType | getValue (StuntDouble *sd) |
Public Member Functions inherited from OpenMD::Field< RealType > | |
| Field (SimInfo *info, const std::string &filename, const std::string &sele, RealType voxelSize) | |
| virtual void | process () |
| virtual void | processFrame (int frame) |
| virtual void | postProcess () |
| virtual void | writeField () |
| virtual std::string | writeValue (RealType v) |
| std::string | writeValue (RealType v) |
| std::string | writeValue (Vector3d v) |
| virtual void | writeVisualizationScript () |
Public Member Functions inherited from OpenMD::StaticAnalyser | |
| StaticAnalyser (SimInfo *info, const std::string &filename, unsigned int nbins) | |
| void | setOutputName (const std::string &filename) |
| const std::string & | getOutputFileName () const |
| void | setStep (int step) |
| int | getStep () const |
| const std::string & | getAnalysisType () const |
| void | setAnalysisType (const std::string &type) |
| void | setParameterString (const std::string ¶ms) |
Additional Inherited Members | |
Protected Member Functions inherited from OpenMD::Field< RealType > | |
| RealType | getDensity (RealType dist, RealType sigma, RealType rcut) |
Protected Member Functions inherited from OpenMD::StaticAnalyser | |
| virtual void | writeOutput () |
Protected Attributes inherited from OpenMD::Field< RealType > | |
| Snapshot * | snap_ |
| int | nProcessed_ |
| string | selectionScript_ |
| SelectionManager | seleMan_ |
| SelectionEvaluator | evaluator_ |
| bool | usePeriodicBoundaryConditions_ |
| RealType | rcut_ |
| RealType | reffective_ |
| RealType | voxelSize_ |
| Vector3i | nBins_ |
| std::vector< std::vector< std::vector< RealType > > > | dens_ |
| std::vector< std::vector< std::vector< RealType > > > | field_ |
Protected Attributes inherited from OpenMD::StaticAnalyser | |
| SimInfo * | info_ {nullptr} |
| std::string | dumpFilename_ |
| int | step_ |
| unsigned int | nBins_ |
| std::string | outputFilename_ |
| std::string | analysisType_ |
| std::string | paramString_ |
| std::vector< OutputData > | data_ |
| std::vector< AtomType * > | outputTypes_ |
| OpenMD::DensityField::DensityField | ( | SimInfo * | info, |
| const std::string & | filename, | ||
| const std::string & | sele1, | ||
| RealType | voxelSize ) |
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virtual |
Implements OpenMD::Field< RealType >.