accept(BaseVisitor *v) | OpenMD::DirectionalAtom | virtual |
addDensity(RealType dens) | OpenMD::StuntDouble | inline |
addDensity(RealType dens, int snapshotNo) | OpenMD::StuntDouble | inline |
addElectricField(const Vector3d &eField) | OpenMD::StuntDouble | inline |
addElectricField(const Vector3d &eField, int snapshotNo) | OpenMD::StuntDouble | inline |
addFlucQFrc(RealType cfrc) | OpenMD::StuntDouble | inline |
addFlucQFrc(RealType cfrc, int snapshotNo) | OpenMD::StuntDouble | inline |
addFlucQPos(RealType charge) | OpenMD::StuntDouble | inline |
addFlucQPos(RealType charge, int snapshotNo) | OpenMD::StuntDouble | inline |
addFlucQVel(RealType cvel) | OpenMD::StuntDouble | inline |
addFlucQVel(RealType cvel, int snapshotNo) | OpenMD::StuntDouble | inline |
addFrc(const Vector3d &frc) | OpenMD::StuntDouble | inline |
addFrc(const Vector3d &frc, int snapshotNo) | OpenMD::StuntDouble | inline |
addParticlePot(const RealType &particlePot) | OpenMD::StuntDouble | inline |
addParticlePot(const RealType &particlePot, int snapshotNo) | OpenMD::StuntDouble | inline |
addPrevDensity(RealType dens) | OpenMD::StuntDouble | inline |
addPrevElectricField(const Vector3d &eField) | OpenMD::StuntDouble | inline |
addPrevFlucQFrc(RealType cfrc) | OpenMD::StuntDouble | inline |
addPrevFlucQPos(RealType charge) | OpenMD::StuntDouble | inline |
addPrevFlucQVel(RealType cvel) | OpenMD::StuntDouble | inline |
addPrevFrc(const Vector3d &frc) | OpenMD::StuntDouble | inline |
addPrevParticlePot(const RealType &particlePot) | OpenMD::StuntDouble | inline |
addPrevSitePotential(RealType spot) | OpenMD::StuntDouble | inline |
addPrevTrq(const Vector3d &trq) | OpenMD::StuntDouble | inline |
addProperty(std::shared_ptr< GenericData > genData) | OpenMD::StuntDouble | |
addSitePotential(RealType spot) | OpenMD::StuntDouble | inline |
addSitePotential(RealType spot, int snapshotNo) | OpenMD::StuntDouble | inline |
addTrq(const Vector3d &trq) | OpenMD::StuntDouble | inline |
addTrq(const Vector3d &trq, int snapshotNo) | OpenMD::StuntDouble | inline |
Atom(AtomType *at) (defined in OpenMD::Atom) | OpenMD::Atom | |
Atom(AtomType *at) (defined in OpenMD::Atom) | OpenMD::Atom | |
atomType_ (defined in OpenMD::Atom) | OpenMD::Atom | protected |
body2Lab(const Vector3d &v) | OpenMD::StuntDouble | inline |
body2Lab(const Vector3d &v, int frame) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | inline |
chargeMass_ (defined in OpenMD::Atom) | OpenMD::Atom | protected |
combineForcesAndTorques(Snapshot *snapA, Snapshot *snapB, RealType multA, RealType multB) | OpenMD::StuntDouble | |
DirectionalAtom(AtomType *dAtomType) (defined in OpenMD::DirectionalAtom) | OpenMD::DirectionalAtom | |
freeze() | OpenMD::StuntDouble | inline |
getA() | OpenMD::StuntDouble | inline |
getA(int snapshotNo) | OpenMD::StuntDouble | inline |
getAtomType() | OpenMD::Atom | inline |
getAtomType() | OpenMD::Atom | inline |
getChargeMass() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
getChargeMass() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
getCOM() | OpenMD::StuntDouble | inline |
getCOM(int snapshotNo) | OpenMD::StuntDouble | inline |
getCOMvel() | OpenMD::StuntDouble | inline |
getCOMvel(int snapshotNo) | OpenMD::StuntDouble | inline |
getCOMw() | OpenMD::StuntDouble | inline |
getCOMw(int snapshotNo) | OpenMD::StuntDouble | inline |
getDensity() | OpenMD::StuntDouble | inline |
getDensity(int snapshotNo) | OpenMD::StuntDouble | inline |
getDipole() | OpenMD::StuntDouble | inline |
getDipole(int snapshotNo) | OpenMD::StuntDouble | inline |
getElectricField() | OpenMD::StuntDouble | inline |
getElectricField(int snapshotNo) | OpenMD::StuntDouble | inline |
getEuler() | OpenMD::StuntDouble | inline |
getEuler(int snapshotNo) | OpenMD::StuntDouble | inline |
getFlucQFrc() | OpenMD::StuntDouble | inline |
getFlucQFrc(int snapshotNo) | OpenMD::StuntDouble | inline |
getFlucQPos() | OpenMD::StuntDouble | inline |
getFlucQPos(int snapshotNo) | OpenMD::StuntDouble | inline |
getFlucQVel() | OpenMD::StuntDouble | inline |
getFlucQVel(int snapshotNo) | OpenMD::StuntDouble | inline |
getFrc() | OpenMD::StuntDouble | inline |
getFrc(int snapshotNo) | OpenMD::StuntDouble | inline |
getGlobalIndex() | OpenMD::StuntDouble | inline |
getGlobalIntegrableObjectIndex() (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | inline |
getGrad() | OpenMD::DirectionalAtom | virtual |
getHybridization() const | OpenMD::Atom | inline |
getI() | OpenMD::DirectionalAtom | virtual |
getIdent() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
getIdent() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
getJ() | OpenMD::StuntDouble | inline |
getJ(int snapshotNo) | OpenMD::StuntDouble | inline |
getLocalIndex() | OpenMD::StuntDouble | inline |
getMass() | OpenMD::StuntDouble | inline |
getParticlePot() | OpenMD::StuntDouble | inline |
getParticlePot(int snapshotNo) | OpenMD::StuntDouble | inline |
getPos() | OpenMD::StuntDouble | inline |
getPos(int snapshotNo) | OpenMD::StuntDouble | inline |
getPrevA() | OpenMD::StuntDouble | inline |
getPrevDensity() | OpenMD::StuntDouble | inline |
getPrevDipole() | OpenMD::StuntDouble | inline |
getPrevElectricField() | OpenMD::StuntDouble | inline |
getPrevEuler() | OpenMD::StuntDouble | inline |
getPrevFlucQFrc() | OpenMD::StuntDouble | inline |
getPrevFlucQPos() | OpenMD::StuntDouble | inline |
getPrevFlucQVel() | OpenMD::StuntDouble | inline |
getPrevFrc() | OpenMD::StuntDouble | inline |
getPrevJ() | OpenMD::StuntDouble | inline |
getPrevParticlePot() | OpenMD::StuntDouble | inline |
getPrevPos() | OpenMD::StuntDouble | inline |
getPrevQ() | OpenMD::StuntDouble | inline |
getPrevQuadrupole() | OpenMD::StuntDouble | inline |
getPrevSitePotential() | OpenMD::StuntDouble | inline |
getPrevTrq() | OpenMD::StuntDouble | inline |
getPrevVel() | OpenMD::StuntDouble | inline |
getProperties() | OpenMD::StuntDouble | |
getPropertyByName(const std::string &propName) | OpenMD::StuntDouble | |
getPropertyNames() | OpenMD::StuntDouble | |
getQ() | OpenMD::StuntDouble | inline |
getQ(int snapshotNo) | OpenMD::StuntDouble | inline |
getQuadrupole() | OpenMD::StuntDouble | inline |
getQuadrupole(int snapshotNo) | OpenMD::StuntDouble | inline |
getSitePotential() | OpenMD::StuntDouble | inline |
getSitePotential(int snapshotNo) | OpenMD::StuntDouble | inline |
getTrq() | OpenMD::StuntDouble | inline |
getTrq(int snapshotNo) | OpenMD::StuntDouble | inline |
getType() | OpenMD::Atom | inlinevirtual |
getType() | OpenMD::Atom | inlinevirtual |
getVel() | OpenMD::StuntDouble | inline |
getVel(int snapshotNo) | OpenMD::StuntDouble | inline |
getVel(Snapshot *snapshot) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | inline |
globalIndex_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
globalIntegrableObjectIndex_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
hyb_ (defined in OpenMD::Atom) | OpenMD::Atom | protected |
isAtom() | OpenMD::StuntDouble | inline |
isCharge() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isCharge() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isDipole() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isDipole() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isDirectional() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isDirectional() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isDirectionalAtom() | OpenMD::StuntDouble | inline |
isFluctuatingCharge() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isFluctuatingCharge() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isGayBerne() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isGayBerne() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isLinear() | OpenMD::StuntDouble | inline |
isMetal() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isMetal() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isMultipole() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isMultipole() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isRigidBody() | OpenMD::StuntDouble | inline |
isShape() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isShape() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isSticky() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
isSticky() (defined in OpenMD::Atom) | OpenMD::Atom | inline |
lab2Body(const Vector3d &v) | OpenMD::StuntDouble | inline |
lab2Body(const Vector3d &v, int frame) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | inline |
linear_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
linearAxis() | OpenMD::StuntDouble | inline |
linearAxis_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
localIndex_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
mass_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
ObjectType enum name (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | |
objType_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
operator=(const StuntDouble &sd) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
otAtom enum value (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | |
otDAtom enum value (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | |
otRigidBody enum value (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | |
removeProperty(const std::string &propName) | OpenMD::StuntDouble | |
rotateBy(const RotMat3x3d &m) | OpenMD::DirectionalAtom | |
setA(const RotMat3x3d &a) | OpenMD::DirectionalAtom | virtual |
setA(const RotMat3x3d &a, int snapshotNo) | OpenMD::DirectionalAtom | virtual |
setChargeMass(RealType cm) (defined in OpenMD::Atom) | OpenMD::Atom | inline |
setChargeMass(RealType cm) (defined in OpenMD::Atom) | OpenMD::Atom | inline |
setDensity(RealType dens) | OpenMD::StuntDouble | inline |
setDensity(RealType dens, int snapshotNo) | OpenMD::StuntDouble | inline |
setElectricField(const Vector3d &eField) | OpenMD::StuntDouble | inline |
setElectricField(const Vector3d &eField, int snapshotNo) | OpenMD::StuntDouble | inline |
setEuler(const Vector3d &euler) | OpenMD::StuntDouble | inline |
setEuler(const Vector3d &euler, int snapshotNo) | OpenMD::StuntDouble | inline |
setFlucQFrc(RealType cfrc) | OpenMD::StuntDouble | inline |
setFlucQFrc(RealType cfrc, int snapshotNo) | OpenMD::StuntDouble | inline |
setFlucQPos(RealType charge) | OpenMD::StuntDouble | inline |
setFlucQPos(RealType charge, int snapshotNo) | OpenMD::StuntDouble | inline |
setFlucQVel(RealType cvel) | OpenMD::StuntDouble | inline |
setFlucQVel(RealType cvel, int snapshotNo) | OpenMD::StuntDouble | inline |
setFrc(const Vector3d &frc) | OpenMD::StuntDouble | inline |
setFrc(const Vector3d &frc, int snapshotNo) | OpenMD::StuntDouble | inline |
setGlobalIndex(int index) | OpenMD::StuntDouble | inline |
setGlobalIntegrableObjectIndex(int index) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | inline |
setHybridization(HybridizationType what) | OpenMD::Atom | inline |
setJ(const Vector3d &angMom) | OpenMD::StuntDouble | inline |
setJ(const Vector3d &angMom, int snapshotNo) | OpenMD::StuntDouble | inline |
setLocalIndex(int index) | OpenMD::StuntDouble | inline |
setMass(RealType mass) | OpenMD::StuntDouble | inline |
setParticlePot(const RealType &particlePot) | OpenMD::StuntDouble | inline |
setParticlePot(const RealType &particlePot, int snapshotNo) | OpenMD::StuntDouble | inline |
setPos(const Vector3d &pos) | OpenMD::StuntDouble | inline |
setPos(const Vector3d &pos, int snapshotNo) | OpenMD::StuntDouble | inline |
setPrevA(const RotMat3x3d &a) | OpenMD::DirectionalAtom | virtual |
setPrevDensity(RealType dens) | OpenMD::StuntDouble | inline |
setPrevElectricField(const Vector3d &eField) | OpenMD::StuntDouble | inline |
setPrevEuler(const Vector3d &euler) | OpenMD::StuntDouble | inline |
setPrevFlucQFrc(RealType cfrc) | OpenMD::StuntDouble | inline |
setPrevFlucQPos(RealType charge) | OpenMD::StuntDouble | inline |
setPrevFlucQVel(RealType cvel) | OpenMD::StuntDouble | inline |
setPrevFrc(const Vector3d &frc) | OpenMD::StuntDouble | inline |
setPrevJ(const Vector3d &angMom) | OpenMD::StuntDouble | inline |
setPrevParticlePot(const RealType &particlePot) | OpenMD::StuntDouble | inline |
setPrevPos(const Vector3d &pos) | OpenMD::StuntDouble | inline |
setPrevQ(const Quat4d &q) | OpenMD::StuntDouble | inline |
setPrevSitePotential(RealType spot) | OpenMD::StuntDouble | inline |
setPrevTrq(const Vector3d &trq) | OpenMD::StuntDouble | inline |
setPrevVel(const Vector3d &vel) | OpenMD::StuntDouble | inline |
setQ(const Quat4d &q) | OpenMD::StuntDouble | inline |
setQ(const Quat4d &q, int snapshotNo) | OpenMD::StuntDouble | inline |
setSitePotential(RealType spot) | OpenMD::StuntDouble | inline |
setSitePotential(RealType spot, int snapshotNo) | OpenMD::StuntDouble | inline |
setSnapshotManager(SnapshotManager *sman) | OpenMD::StuntDouble | inline |
setTrq(const Vector3d &trq) | OpenMD::StuntDouble | inline |
setTrq(const Vector3d &trq, int snapshotNo) | OpenMD::StuntDouble | inline |
setType(const std::string &) | OpenMD::StuntDouble | inlinevirtual |
setVel(const Vector3d &vel) | OpenMD::StuntDouble | inline |
setVel(const Vector3d &vel, int snapshotNo) | OpenMD::StuntDouble | inline |
snapshotMan_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
storage_ (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
StuntDouble(ObjectType objType, DataStoragePointer storage) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
StuntDouble(const StuntDouble &sd) (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | protected |
zeroForcesAndTorques() | OpenMD::StuntDouble | |
~StuntDouble()=default (defined in OpenMD::StuntDouble) | OpenMD::StuntDouble | virtual |