Inheritance diagram for OpenMD::HBondPersistence:

Public Member Functions
	HBondPersistence (SimInfo *info, const std::string &filename, const std::string &sele1, const std::string &sele2, double OOCut, double thetaCut, double OHCut)

Public Member Functions inherited from OpenMD::TimeCorrFunc< RealType >
	TimeCorrFunc (SimInfo *info, const std::string &filename, const std::string &sele1, const std::string &sele2)

virtual void	doCorrelate ()

const std::string &	getCorrFuncType () const

void	setCorrFuncType (const std::string &type)

void	setParameterString (const std::string &params)

void	setLabelString (const std::string &label)

Public Member Functions inherited from OpenMD::DynamicProperty
void	setOutputName (const std::string &filename)

const std::string &	getOutputFileName () const

Additional Inherited Members
Protected Member Functions inherited from OpenMD::TimeCorrFunc< RealType >
virtual void	preCorrelate ()

virtual void	validateSelection (SelectionManager &seleMan)

virtual void	correlateFrames (int frame1, int frame2, int timeBin)

virtual void	writeCorrelate ()

void	writeCorrelate ()

void	writeCorrelate ()

Protected Attributes inherited from OpenMD::TimeCorrFunc< RealType >
RealType	deltaTime_

unsigned int	nTimeBins_

int	nFrames_

std::vector< RealType >	histogram_

std::vector< int >	count_

std::vector< RealType >	times_

SimInfo *	info_

DumpReader *	reader_

std::string	dumpFilename_

SelectionManager	seleMan1_

SelectionManager	seleMan2_

Snapshot *	currentSnapshot_

std::string	selectionScript1_

std::string	selectionScript2_

SelectionEvaluator	evaluator1_

SelectionEvaluator	evaluator2_

bool	uniqueSelections_

bool	autoCorrFunc_

bool	doSystemProperties_

bool	doMolecularProperties_

bool	doObjectProperties_

bool	doAtomicProperties_

bool	doBondProperties_

std::string	corrFuncType_

std::string	paramString_

std::string	labelString_

std::vector< std::vector< int > >	sele1ToIndex_

std::vector< std::vector< int > >	sele2ToIndex_

ProgressBarPtr	progressBar_

Protected Attributes inherited from OpenMD::DynamicProperty
std::string	outputFilename_

Detailed Description

Definition at line 52 of file HBondPersistence.hpp.

Constructor & Destructor Documentation

OpenMD::HBondPersistence::HBondPersistence	(	SimInfo *	info,
		const std::string &	filename,
		const std::string &	sele1,
		const std::string &	sele2,
		double	OOCut,
		double	thetaCut,
		double	OHCut )

Definition at line 52 of file HBondPersistence.cpp.

The documentation for this class was generated from the following files: