OpenMD 3.2
Molecular Dynamics in the Open
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OpenMD::IcosahedralOfR Class Reference
Inheritance diagram for OpenMD::IcosahedralOfR:

Public Member Functions

 IcosahedralOfR (SimInfo *info, const std::string &filename, const std::string &sele, double rCut, unsigned int nbins, RealType len)
virtual void collectHistogram (std::vector< RealType > q, std::vector< ComplexType > what, RealType distCOM)
virtual void writeOrderParameter ()
Public Member Functions inherited from OpenMD::BOPofR
 BOPofR (SimInfo *info, const std::string &filename, const std::string &sele, double rCut, unsigned int nbins, RealType len)
virtual void process ()
Public Member Functions inherited from OpenMD::StaticAnalyser
 StaticAnalyser (SimInfo *info, const std::string &filename, unsigned int nbins)
void setOutputName (const std::string &filename)
const std::string & getOutputFileName () const
void setStep (int step)
int getStep () const
const std::string & getAnalysisType () const
void setAnalysisType (const std::string &type)
void setParameterString (const std::string &params)

Additional Inherited Members

Protected Member Functions inherited from OpenMD::BOPofR
virtual void initializeHistogram ()
Protected Member Functions inherited from OpenMD::StaticAnalyser
virtual void writeOutput ()
Protected Attributes inherited from OpenMD::BOPofR
SnapshotcurrentSnapshot_
std::string selectionScript_
SelectionManager seleMan_
SelectionEvaluator evaluator_
RealType rCut_
int frameCounter_
RealType len_
RealType deltaR_
std::map< std::pair< int, int >, int > m2Min
std::map< std::pair< int, int >, int > m2Max
std::map< std::pair< int, int >, std::vector< RealType > > w3j
std::vector< int > RCount_
std::vector< int > WofR_
std::vector< int > QofR_
Protected Attributes inherited from OpenMD::StaticAnalyser
SimInfoinfo_ {nullptr}
std::string dumpFilename_
int step_
unsigned int nBins_
std::string outputFilename_
std::string analysisType_
std::string paramString_
std::vector< OutputDatadata_
std::vector< AtomType * > outputTypes_
Static Protected Attributes inherited from OpenMD::BOPofR
static const int lMax_ = 6

Detailed Description

Definition at line 93 of file BOPofR.hpp.

Constructor & Destructor Documentation

◆ IcosahedralOfR()

OpenMD::IcosahedralOfR::IcosahedralOfR ( SimInfo * info,
const std::string & filename,
const std::string & sele,
double rCut,
unsigned int nbins,
RealType len )

Definition at line 287 of file BOPofR.cpp.

Member Function Documentation

◆ collectHistogram()

void OpenMD::IcosahedralOfR::collectHistogram ( std::vector< RealType > q,
std::vector< ComplexType > what,
RealType distCOM )
virtual

Implements OpenMD::BOPofR.

Definition at line 294 of file BOPofR.cpp.

◆ writeOrderParameter()

void OpenMD::IcosahedralOfR::writeOrderParameter ( )
virtual

Implements OpenMD::BOPofR.

Definition at line 326 of file BOPofR.cpp.


The documentation for this class was generated from the following files: