OpenMD 3.1
Molecular Dynamics in the Open
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OpenMD::IcosahedralOfR Class Reference
+ Inheritance diagram for OpenMD::IcosahedralOfR:

Public Member Functions

 IcosahedralOfR (SimInfo *info, const std::string &filename, const std::string &sele, double rCut, unsigned int nbins, RealType len)
 
virtual void collectHistogram (std::vector< RealType > q, std::vector< ComplexType > what, RealType distCOM)
 
virtual void writeOrderParameter ()
 
- Public Member Functions inherited from OpenMD::BOPofR
 BOPofR (SimInfo *info, const std::string &filename, const std::string &sele, double rCut, unsigned int nbins, RealType len)
 
virtual void process ()
 
- Public Member Functions inherited from OpenMD::StaticAnalyser
 StaticAnalyser (SimInfo *info, const std::string &filename, unsigned int nbins)
 
void setOutputName (const std::string &filename)
 
const std::string & getOutputFileName () const
 
void setStep (int step)
 
int getStep () const
 
const std::string & getAnalysisType () const
 
void setAnalysisType (const std::string &type)
 
void setParameterString (const std::string &params)
 

Additional Inherited Members

- Protected Member Functions inherited from OpenMD::BOPofR
virtual void initializeHistogram ()
 
- Protected Member Functions inherited from OpenMD::StaticAnalyser
virtual void writeOutput ()
 
- Protected Attributes inherited from OpenMD::BOPofR
SnapshotcurrentSnapshot_
 
std::string selectionScript_
 
SelectionManager seleMan_
 
SelectionEvaluator evaluator_
 
RealType rCut_
 
int frameCounter_
 
RealType len_
 
RealType deltaR_
 
std::map< std::pair< int, int >, int > m2Min
 
std::map< std::pair< int, int >, int > m2Max
 
std::map< std::pair< int, int >, std::vector< RealType > > w3j
 
std::vector< int > RCount_
 
std::vector< int > WofR_
 
std::vector< int > QofR_
 
- Protected Attributes inherited from OpenMD::StaticAnalyser
SimInfoinfo_ {nullptr}
 
std::string dumpFilename_
 
int step_
 
unsigned int nBins_
 
std::string outputFilename_
 
std::string analysisType_
 
std::string paramString_
 
std::vector< OutputDatadata_
 
std::vector< AtomType * > outputTypes_
 
- Static Protected Attributes inherited from OpenMD::BOPofR
static const int lMax_ = 6
 

Detailed Description

Definition at line 90 of file BOPofR.hpp.

Constructor & Destructor Documentation

◆ IcosahedralOfR()

OpenMD::IcosahedralOfR::IcosahedralOfR ( SimInfo * info,
const std::string & filename,
const std::string & sele,
double rCut,
unsigned int nbins,
RealType len )

Definition at line 284 of file BOPofR.cpp.

Member Function Documentation

◆ collectHistogram()

void OpenMD::IcosahedralOfR::collectHistogram ( std::vector< RealType > q,
std::vector< ComplexType > what,
RealType distCOM )
virtual

Implements OpenMD::BOPofR.

Definition at line 291 of file BOPofR.cpp.

◆ writeOrderParameter()

void OpenMD::IcosahedralOfR::writeOrderParameter ( )
virtual

Implements OpenMD::BOPofR.

Definition at line 323 of file BOPofR.cpp.


The documentation for this class was generated from the following files: