OpenMD 3.1
Molecular Dynamics in the Open
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Public Member Functions | |
RNEMDRTheta (SimInfo *info, const std::string &filename, const std::string &sele, const std::string &comsele, int nrbins, RealType binWidth, int nanglebins) | |
void | processFrame (int frame) |
void | processStuntDouble (StuntDouble *, int) |
std::pair< int, int > | getBins (Vector3d pos) |
void | writeOutput () |
Public Member Functions inherited from OpenMD::ShellStatistics | |
ShellStatistics (SimInfo *info, const std::string &filename, const std::string &sele, const std::string &comsele, int nbins, RealType binWidth) | |
virtual int | getBin (Vector3d pos) |
void | setCoordinateOrigin (Vector3d co) |
Public Member Functions inherited from OpenMD::SpatialStatistics | |
SpatialStatistics (SimInfo *info, const std::string &filename, const std::string &sele, int nbins) | |
virtual void | process () |
Public Member Functions inherited from OpenMD::StaticAnalyser | |
StaticAnalyser (SimInfo *info, const std::string &filename, unsigned int nbins) | |
void | setOutputName (const std::string &filename) |
const std::string & | getOutputFileName () const |
void | setStep (int step) |
int | getStep () const |
const std::string & | getAnalysisType () const |
void | setAnalysisType (const std::string &type) |
void | setParameterString (const std::string ¶ms) |
Additional Inherited Members | |
Protected Attributes inherited from OpenMD::ShellStatistics | |
Vector3d | coordinateOrigin_ |
RealType | binWidth_ |
std::string | comSele_ |
SelectionManager | comSeleMan_ |
SelectionEvaluator | comEvaluator_ |
Protected Attributes inherited from OpenMD::SpatialStatistics | |
Snapshot * | currentSnapshot_ |
int | nProcessed_ |
std::string | selectionScript_ |
SelectionEvaluator | evaluator_ |
SelectionManager | seleMan_ |
Protected Attributes inherited from OpenMD::StaticAnalyser | |
SimInfo * | info_ {nullptr} |
std::string | dumpFilename_ |
int | step_ |
unsigned int | nBins_ |
std::string | outputFilename_ |
std::string | analysisType_ |
std::string | paramString_ |
std::vector< OutputData > | data_ |
std::vector< AtomType * > | outputTypes_ |
Definition at line 111 of file RNEMDStats.hpp.
OpenMD::RNEMDRTheta::RNEMDRTheta | ( | SimInfo * | info, |
const std::string & | filename, | ||
const std::string & | sele, | ||
const std::string & | comsele, | ||
int | nrbins, | ||
RealType | binWidth, | ||
int | nanglebins ) |
Definition at line 654 of file RNEMDStats.cpp.
std::pair< int, int > OpenMD::RNEMDRTheta::getBins | ( | Vector3d | pos | ) |
Definition at line 710 of file RNEMDStats.cpp.
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virtual |
Reimplemented from OpenMD::ShellStatistics.
Definition at line 721 of file RNEMDStats.cpp.
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inlinevirtual |
Implements OpenMD::SpatialStatistics.
Definition at line 117 of file RNEMDStats.hpp.
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virtual |
Reimplemented from OpenMD::StaticAnalyser.
Definition at line 786 of file RNEMDStats.cpp.